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Name : dapE (LSA0220_c) Accession : YP_394833.1 Strain : Lactobacillus sakei 23K Genome accession: NC_007576 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : 3.5.1.18 Position : 217034 - 218332 bp Length : 1299 bp Strand : - Note : dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is simi DNA sequence : ATGATGGAAAAAACTGAAAAAATCGCAATTTTAGAAAAACTGGTCTCAATTGATACAACAGACCAAGCAGAAGGTGTGAT TGCCGACTACTTAGCCGATCTATTCACACAACACGGTATCCAGACTGAAAAAGTGGCTTCTAAACCAGGCCGCGAAAACT TAGTGGCCTATCTAGGTGAAGCAACCGACAAAGTCCTCGCCGTGACTGGTCATATGGACGTCGTCAGCATCGGCGATCGC AGCAAATGGACGAGTGATCCCTTCACCCTAACCGCTCGCGATGGTAAACTCTTCGGTCGGGGTGCTACTGACATGAAATC TGGACTGGCCGCTCTTGTGATTGCAATGATCGAATTACACGATCAAAACGTCCCATTAAACGGTCAAATCAAACTCCTTG CAACAGTCGATGAAGAAAAGAACGAAACTGGTGCCCAAACTTTAACTGCACAAGGTTATGCCGATAATTTGACAGCCTTA TTAGTTGCCGAACCATCTGGCGTTGATAAGCAAGCCTTAGCAAACAGCACCGACAAATTTCCCACAGAAATGGTCCAAAA ATTACTCGCAGCTAATCAAACCAATGAACAACATTTTCTGATTTTCGCCCACAACGGTTCCCTTGATTTTAAAGTGACTG CAACTGGTAAAACAGCCCACAGTTCAATGCCTGAACTCGGTATTAACGCAATTGATCATTTGCTCGCCTACTATAATCGT CAAAAACAATACTTCGATCAAAAGCATCCCATCGATGATGTCCTCGGCGATATTGTTCCCGTCACAACCTTAATCAATGG TGGTGAACAAATTAATTCGGTCCCCGGTCACGCAGAACTCACTTGCCGCGTTCGCACGACCCCCGCATTAACTGGCGACC AAGTCATTGCCGATCTCAATGCCATTATTGCTGAACTTAACCAACAAACAGACATGAATTTAGCATTAACTGTCATTAAT AACCAACCACCGGTTAAAAGTAATCCACAGGCACCATTCATTCAAAGTGTTCAAAAAATCGGCGCACAAAAGTTATCCCA AGCTTATCCACTGATGCACGTTGCTGGTGGTACTGATGCCGCCCACTTTGCTAAGAATAACCCCAACTTACCAGTGGCAG TTGTCGGCCCCGGCAATGATACCAGTCATATGATCGACGAATACGTTGACGAAGAAAGGCTCCTATGTCAAGAATCCGGA CATAAAAGTACGAGCAAATTTGACTTTCAATTTAAATTACTTAATTTAATTTTCGGAGGCCGAAGTTTTAGTCCCGTTCA GATTTTAAAAACGCTTTAG Protein sequence : MMEKTEKIAILEKLVSIDTTDQAEGVIADYLADLFTQHGIQTEKVASKPGRENLVAYLGEATDKVLAVTGHMDVVSIGDR SKWTSDPFTLTARDGKLFGRGATDMKSGLAALVIAMIELHDQNVPLNGQIKLLATVDEEKNETGAQTLTAQGYADNLTAL LVAEPSGVDKQALANSTDKFPTEMVQKLLAANQTNEQHFLIFAHNGSLDFKVTATGKTAHSSMPELGINAIDHLLAYYNR QKQYFDQKHPIDDVLGDIVPVTTLINGGEQINSVPGHAELTCRVRTTPALTGDQVIADLNAIIAELNQQTDMNLALTVIN NQPPVKSNPQAPFIQSVQKIGAQKLSQAYPLMHVAGGTDAAHFAKNNPNLPVAVVGPGNDTSHMIDEYVDEERLLCQESG HKSTSKFDFQFKLLNLIFGGRSFSPVQILKTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 3e-76 | 43 |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 4e-77 | 43 |
