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Name : clpL (LSA0207) Accession : YP_394816.1 Strain : Lactobacillus sakei 23K Genome accession: NC_007576 Putative virulence/resistance : Virulence Product : ATPase/chaperone ClpL, specificity factor for ClpP protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 199842 - 201965 bp Length : 2124 bp Strand : + Note : - DNA sequence : ATGGCAAATATGTACGGAAATGACCCATTTTTTAATAATGATATGGATGATATCTTCAATCAAGTTTTTAGAAGAATGGG GAATTCAGAGTCAGCGCGATATGTGATTAACGGACGAGAATTATCACCGGATGAGTTTGCTCAGTATCGGGCAACTGGTA AATTACCTAATCGAGAAAAAGAAATTGAAATTAAGCAAAATGGTGAACATGCTCTTAAAAAAGGTGGCATTCTTGAAAAA TTAGGTCGAAACTTAACCCAGGAAGCACGGGATGGTTTATTAGATCCTGTCATTGGCCGGTATAATGAAATCCAAGAAAC AGCCGAAATATTAAGTCGCCGGACTAAAAATAATCCAATTCTAGTTGGTGATGCAGGTGTTGGGAAGACCGCGGTGGTTG AAGGATTAGCACAAGAAATTGTGGCTGGAAAAGTGCCTGAAACCATTAAAGATAAAGAAATCTACTCAATCGATTTGTCA TCACTAGAAGCCGGGACACAATATCGGGGCTCGTTTGAAGAAAATATTAAAAATTTAATTAAAGAAGTAAAAGCAGCCGG GAACGTCATTCTCTTTTTCGATGAAATTCATCAGATTTTAGGGATAGGTTCAACCGGTGGCGAAGATGGCGGCAAAGGGT TAGCTGATATTATCAAGCCAGCTTTATCACGTGGTGAATTGACGGTAATCGGTGCGACAACGCAAGATGAATATCGCAAT ACTATTTTGAAAAATGCCGCGTTAGCAAGACGGTTCAACGATGTGCTGGTGAATGAACCTAGCGCAGCAGATACGGTTAA AATCTTGCAAGGGATTAAAGGTTTGTACGAAAAACACCATCACATTGAACTACCAGATGATGTTTTGAAAGCGGCTGTTG ACTATTCTGTTCAATATATTCCACAACGGACGTTGCCAGATAAGGCAATCGATTTATTAGATATGACCGCCGCTCATTTA GCAGCTAAACGGCCAGAAACAGATAAAGCTAAATTGGCAGCTGAACTTAAACAGTTAGAAGCGGATAAAGCCGAAGCTGT CGAGGCGGAGAATTATCAAACTGCTGAAGATTTAAAAGTAAGGATTGAGAAGATTAAGACGCAATTAGAAAATAATGATC AGCATGCGGCTGTAATGATTGCGACTGTTGATGATATTGCGCAATCTGTTGAAAGATTAACTGGGATTCCCGTTGCTAAA ATGGGGAGCAATGATATTCAACGCTTGAAGAACTTAGGTCAACGGTTAAAAGACAAGGTCATTGGTCAAGATGAAGCTGT TGAAATGGTAGCACGCGCAATTCGCAGAAATCGGGCAGGTTTTTCTGAAGGCAACCAACCAATTGGCAGTTTCTTATTTG TTGGTCCAACTGGGGTTGGGAAAACTGAATTAGCAAAACAATTAGCCTTAGATATGTTTGGTAACAAAGAAGCGATTATC CGTTTGGATATGAGTGAATATGCTGACCGGACAGCCGTTTCTAAATTGATAGGGACGACAGCCGGTTATGTTGGCTATGA CGATAATTCCAATACATTAACCGAACGCGTTCGTCGTAACCCATATTCAATTGTCTTGTTTGATGAAATTGAAAAAGCTG ATCCACAAGTTTTAACATTATTACTACAAGTGATGGACGATGGTCGCTTAACGGATGGTCAAGGGAACGTGATCGACTTT AAGAACACGGTGATTATCGCGACATCTAATGCCGGTTTTGGCAATGAAAAATTAACCATGAACGACCAAGAAGATGCTAA GTTATTAGATAAGTTAGCACCATACTTCAGACCAGAATTCTTAAACCGGTTTAACGGGATTGTTGAATTTACGCATTTAA CGAAAGCTGACTTATCACAAATTGTGGATTTAATGTTAACCAATGTTGAACAAACATTAGCTAAAAAAGAATTGACCTTA GTTGTTTCAAAAGAAGCTAAGGATTGGTTGATGGAAGAAGGCTATGACGAAGCAATGGGAGCTCGTCCATTGAGACGGGT TATTGAACAACAAATCCGAGATAAAGTGACTGATTTTTATCTCGACCATGCAGATGTCAAAGACTTAAAGGCCGATTTAG TTGATGATCAAATTGTTATTCAGGCAGCTGACTCTGAAAACTAA Protein sequence : MANMYGNDPFFNNDMDDIFNQVFRRMGNSESARYVINGRELSPDEFAQYRATGKLPNREKEIEIKQNGEHALKKGGILEK LGRNLTQEARDGLLDPVIGRYNEIQETAEILSRRTKNNPILVGDAGVGKTAVVEGLAQEIVAGKVPETIKDKEIYSIDLS SLEAGTQYRGSFEENIKNLIKEVKAAGNVILFFDEIHQILGIGSTGGEDGGKGLADIIKPALSRGELTVIGATTQDEYRN TILKNAALARRFNDVLVNEPSAADTVKILQGIKGLYEKHHHIELPDDVLKAAVDYSVQYIPQRTLPDKAIDLLDMTAAHL AAKRPETDKAKLAAELKQLEADKAEAVEAENYQTAEDLKVRIEKIKTQLENNDQHAAVMIATVDDIAQSVERLTGIPVAK MGSNDIQRLKNLGQRLKDKVIGQDEAVEMVARAIRRNRAGFSEGNQPIGSFLFVGPTGVGKTELAKQLALDMFGNKEAII RLDMSEYADRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIVLFDEIEKADPQVLTLLLQVMDDGRLTDGQGNVIDF KNTVIIATSNAGFGNEKLTMNDQEDAKLLDKLAPYFRPEFLNRFNGIVEFTHLTKADLSQIVDLMLTNVEQTLAKKELTL VVSKEAKDWLMEEGYDEAMGARPLRRVIEQQIRDKVTDFYLDHADVKDLKADLVDDQIVIQAADSEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-134 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpL | YP_394816.1 | ATPase/chaperone ClpL, specificity factor for ClpP protease | VFG0080 | Protein | 2e-140 | 47 |
| clpL | YP_394816.1 | ATPase/chaperone ClpL, specificity factor for ClpP protease | VFG0079 | Protein | 5e-133 | 45 |
