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Name : serS (LSA1803) Accession : YP_396416.1 Strain : Lactobacillus sakei 23K Genome accession: NC_007576 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1792494 - 1793768 bp Length : 1275 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATATCAGAGTAATTCGGGAAAATGTCCAATGGGCAAAGGATAAATTAGCGACTCGCGGCATTGATGCTGCAGA AATCGACGAGGTAGTTGCCTTAGATGAAAAACGCCGCGCTTTAATCGTCCGCACAGAAGAATTGAAGAAAAATAGAAACG CTGCTTCAGAAGCAATCGCTGTTGCTAAACGCAATAAGGAAGATGCAACTGAACAAATCGCTGCTATGAAGAACGTCGGT GCAGAAATTAAAGAATTAGATGCACAATTAGCTGAAGTGAAGGAAAAAGTAGACTATATCTTGGTTCGCTTACCTAACTT CCCTGATGATTCAGCACCAGTTGGTTTGGATGAAAGCTTCAGCCGTGAAGAACGTAAATGGTCAACACCACGTGAATTTG ATTTCGAACCATTAGCACACTGGGATATCGGTGAAAAACTTGGTATTTTAGATTTCGAACGTGCTGCTAAAGTTTCAGGC AGCCGTTTCGTTTATTACAAGGGTGCTGGTGCACGTTTGGAACGGGCCGTTTATAACTTTATGTTAGATCAACATGCCAA AGAAGGTTATGAAGAAATGATTACCCCTTACTTGGTTAATGGTGAATCAATGTTTGGAACTGGCCAATTTCCTAAGTTTA CGGAAGATGTTTACACAATGACTAACGAAGGCGAACCAATGACCTTGATTCCAACTGCCGAAGTGCCATTGACAAACTTC TACCGTGATGAAATCTTAGATGGTGCACAATTGCCAATCTACTTCACAGCCTTATCACCAGCCTTCCGTTCAGAAGCTGG GAGTGCCGGCCGTGATACGCGTGGTTTAATCCGGATGCACCAATTTAACAAAGTTGAAATGGTGAAATTCACAAAACCTG AAGAATCATTCAACGAATTAGAAAAAATGACCGCCGATGCTGAAAATATCTTAAAAGCATTGAACTTGCCATACCACGTT ATCACATTGGCAACTGGCGATGCCAGCTTCACATCAGCTAAGACTTATGATATTGAAGTTTGGTTACCCGCTCAAAATAC GTACCGCGAAATCTCAAGCTGTTCAGATTGTACAGACTTCCAAGCACGCCGCGCCCAAATTCGTTACCGTGACGAAGATG GCCACGTCAACTTGGTCCACACATTGAACGGTTCAGGCCTAGCAGTTGGCCGGACAGTTGCAGCTATTTTGGAAAACTAT CAAAATGAAGACGGTACTGTTACAATCCCAGAACCATTAGTACCATACATGGGCGGTATGACAAAAATTGGCTAG Protein sequence : MLDIRVIRENVQWAKDKLATRGIDAAEIDEVVALDEKRRALIVRTEELKKNRNAASEAIAVAKRNKEDATEQIAAMKNVG AEIKELDAQLAEVKEKVDYILVRLPNFPDDSAPVGLDESFSREERKWSTPREFDFEPLAHWDIGEKLGILDFERAAKVSG SRFVYYKGAGARLERAVYNFMLDQHAKEGYEEMITPYLVNGESMFGTGQFPKFTEDVYTMTNEGEPMTLIPTAEVPLTNF YRDEILDGAQLPIYFTALSPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKFTKPEESFNELEKMTADAENILKALNLPYHV ITLATGDASFTSAKTYDIEVWLPAQNTYREISSCSDCTDFQARRAQIRYRDEDGHVNLVHTLNGSGLAVGRTVAAILENY QNEDGTVTIPEPLVPYMGGMTKIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-142 | 69 |
