Gene Information

Name : mtsC (LSA0180)
Accession : YP_394789.1
Strain : Lactobacillus sakei 23K
Genome accession: NC_007576
Putative virulence/resistance : Resistance
Product : manganese ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 173256 - 173996 bp
Length : 741 bp
Strand : +
Note : -

DNA sequence :
ATGTTAACAGTTAAGAACCTCACCGTTGCTTACGATGACACACCAGTATTTACTGATGTTGCCGTTCACTTTGACGCAGG
CAAAATCACTGGCATCATTGGACCAAACGGTGCAGGCAAATCAACACTCATTAAAGCAATATTAGGGTTGGTTAAAGCAC
AGCAAGGCTCAGTTTTATATCAAGGAAAATCAATGCGGGCTGTCCAAAAACAAGTTGCATACGATGAACAGCGAAAAGAT
TTGGATTTAAATTTTCCAATCAGCGTTTTTGATGTTGTATTAACAGGCACGTATGGCAAGTTAGGTTTGTTTCGCGATCC
AGGCAAGCAGGCAATAGCGGCCAGTCGAGCAGCACTAGAACAGGTGGCCCTCGCTGATTTTGAACGTCGCCAAATTGGCC
AGTTATCAGGGGGCCAATTGCAACGGGTTTTCGTGGCCCGCGCAATTGTACAAGAAGCGGAGATCATTATTTTAGATGAA
CCCTTTGTCGGCATTGATTTACAAAGTGAGACGGCAATCATGGCCATTATGAAACAGTGGCGGGATGCAGGGAAGACGAT
TATTGTTATTCATCATGATTTGAATAAGGTGTCACAGTATTTTGACGATTTAGTGGTTATGAATCACGGTATCGTAGATT
ATGGTCCGACTGATCAAGTGTATAATGCCCAGAATATTGAGCGCGCATTTAGTGCCGACTTATCGGCCGTCTTGTTTGAA
AAACAGGAGGTAGACCAATGA

Protein sequence :
MLTVKNLTVAYDDTPVFTDVAVHFDAGKITGIIGPNGAGKSTLIKAILGLVKAQQGSVLYQGKSMRAVQKQVAYDEQRKD
LDLNFPISVFDVVLTGTYGKLGLFRDPGKQAIAASRAALEQVALADFERRQIGQLSGGQLQRVFVARAIVQEAEIIILDE
PFVGIDLQSETAIMAIMKQWRDAGKTIIVIHHDLNKVSQYFDDLVVMNHGIVDYGPTDQVYNAQNIERAFSADLSAVLFE
KQEVDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 1e-46 42
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-46 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mtsC YP_394789.1 manganese ABC transporter ATP-binding protein BAC0400 Protein 3e-50 45