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Name : rpmE2 (LSA1627) Accession : YP_396240.1 Strain : Lactobacillus sakei 23K Genome accession: NC_007576 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L31 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0254 EC number : - Position : 1611937 - 1612200 bp Length : 264 bp Strand : - Note : RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially g DNA sequence : ATGAAACAAGGTATTCATCCAGATTATCACAAGGTTGTATTTATGGATTCATCAACTGGCTTCAAGTTCATCTCAGGTTC AACTGCTAACTCAGCTGAAACTGTTGAATGGGAAGACGGTAACACATATCCATTAATTCGTGTTGAAATTTCATCAGATT CACATCCATTCTACACTGGTAAACAAAAATTTACTCAAGCAGATGGTCGTGTCGATCGTTTCAACAAAAAATATGGTTTT GCAGACAAGAACGCTGCCAAATAA Protein sequence : MKQGIHPDYHKVVFMDSSTGFKFISGSTANSAETVEWEDGNTYPLIRVEISSDSHPFYTGKQKFTQADGRVDRFNKKYGF ADKNAAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rpmE2 | NP_287095.1 | 50S ribosomal protein L31 | Not tested | TAI | Protein | 2e-12 | 46 |
| rpmE2 | NP_286687.1 | 50S ribosomal protein L31 | Not tested | TAI | Protein | 2e-12 | 46 |
