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Name : LSA1566 (LSA1566) Accession : YP_396180.1 Strain : Lactobacillus sakei 23K Genome accession: NC_007576 Putative virulence/resistance : Unknown Product : transcription accessory protein, RNA-binding Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1536852 - 1539029 bp Length : 2178 bp Strand : - Note : - DNA sequence : ATGACTGATATTCAACAACTTGTCACCAAACAACTGACGCAATATCGACCACAACAAATTAATGCCGTGTTAACCTTATT AGACGAAGGTAACACCGTACCATTTGTGGCGCGGTATCGAAAGGAACGGACTGGTAGTTTAGACGAAGTTCAAATTCGCG AAATCGAACACACCTTCCAATACTTAACAACGCTTGAAAAACGGAAGACCGATATTATCAAGAATATTGCCGAACAAGCT AAGTTAACGCCGGCTTTACAAAAGCAAATCGAAGCCGCTAGCCAATTACAAGTGCTTGAGGATTTATACCTGCCTTATAA GCAAAAACGGCGGACAAAGGCGACGATTGCTAAAGAAGCTGGGTTAGAACCGTTTGCCAACCTGATTGCGCAATTACCGA ACTTTTCAGAACAAGTCCTCCTGGAAAAAGCGGCCGATTATCTTAACCCAGACCAAAAGATTACCGATACAGATGCTGTT TTAGCGGGTGTACATGAAATTATCGCTGAAAATATTAGTGAAACAGCTACTTTCCGTGACTGGACACGACAATACACCCG TCAAAACGGGCAACTTGTGAGTCAGGTGAAAGATGCCGACAGCGATGATAAGCAAGTTTATCAAATCTATTATGATTTCT CAGCACCGATTAATAAGATTGCGGAACATCAATATTTAGCGATTAATCGTGGCGAACACGAAGGTATCTTGAAGGTGAAG CTAGAAGTTGCCGAAAATATGATCGTTGGACATATTGCTCAAGCCGTTATTCACGGTCAAGACTCAGCTGCCGCCCAAAT TATTAAGACAGCTATTGAAGATGCCTATAAACGGTTCATTGGCCCGGCCATTGAACGTGAATTGCGGAAGCAGTTAAAAG AAAAGGCTGATCAACAAGCGATTGCCGTCTTTGGCGATAATTTAAAGCATCTTTTATTACAACCGCCTTTGAAAGGCAAA GTTGTTTTAGGCTTTGACCCCGCTTATCGAACAGGCTGTAAATTAGCCGTTGTCGATGGGACTGGGAAATTTCTAGATAA ATTAGTAATCTATCCGCATAAACCAGCTGCAGCGCCTAAACGAGCAGCAGCTGCCGATGAATTCAAGCAATTCCTTGAAA AATATAATGTTGAAATGATTGCAATCGGGAATGGGACTGCTAGTCGTGAATCTGAAGAATTTGTGGCATCAGTTTTAAAA ACCATTTCCCGGGAAATCTTTTACGTGATTGTCAACGAAGCAGGGGCTTCCGTTTATTCAGCAAGTGATACAGCGCGGGC TGAATTCCCAGATCTACATGTTGAAGAGCGGAGTGCGATTAGTATCGCACGGCGCTTACAAGATCCCTTAGCAGAATTGA TTAAGATTGATCCACAAGCAGTCGGTGTCGGGCAATACCAACACGATGTTGCCCAAAAGGAATTGACGACGCAATTAGAC GTAGTCATTGAAGATGTTGTCAATAGCGTAGGGGTTAACTTGAACACCGCTAGTCCACAACTCTTGCAACATATTTCTGG GTTATCAGCGACGACTGCCCAAAATATTGTCCAATACCGTAACGAAAACGGCTTATATCAAAAACGCAGTGAATTGAAGA AAGTGCCGCGCTTAGGCCCTAAGGCATTCGAACAAGCCGTTGGGTTCTTGCGAATCATCGGTGGCGATAACCCATTAGAC AATACGGATATTCATCCTGAAAGCTATCCAGTAGCCAAGGCAATTTTAAAATCGTTGGGTGTCACTTTGGAAGCTTTAGG AACACCAAAATTATCAGCAGCAATTAAGCAATTAACAGTGACCGATTTGGCGACCGAATTAGCGGTCGGCTCTGAAACAC TTGAAGATATCTTAAGTGGCTTACAAAAACCAGGTCGGGATTTACGGGATCAAATGACAGCACCACTGCTACGGCATGAT GTCTTAACCCTCGCCGATTTGAAACCGAACATGGCCCTAGAAGGAACCGTGCGGAATGTCATTGATTTCGGTGCTTTTGT GGATATCGGTGTTAAACATGATGGCTTAGTTCATATTTCGCAATTGGCCAATCACTTTGTTAAACATCCATCTGATGAAG TTTCAGTCGGTGATGTTGTTCAGGTTTGGGTCTTAAGCGTCGATCAAGAACGTGAACGGGTTCAATTGACGATGAAGGCG CCTAAAGCAACTGATTAA Protein sequence : MTDIQQLVTKQLTQYRPQQINAVLTLLDEGNTVPFVARYRKERTGSLDEVQIREIEHTFQYLTTLEKRKTDIIKNIAEQA KLTPALQKQIEAASQLQVLEDLYLPYKQKRRTKATIAKEAGLEPFANLIAQLPNFSEQVLLEKAADYLNPDQKITDTDAV LAGVHEIIAENISETATFRDWTRQYTRQNGQLVSQVKDADSDDKQVYQIYYDFSAPINKIAEHQYLAINRGEHEGILKVK LEVAENMIVGHIAQAVIHGQDSAAAQIIKTAIEDAYKRFIGPAIERELRKQLKEKADQQAIAVFGDNLKHLLLQPPLKGK VVLGFDPAYRTGCKLAVVDGTGKFLDKLVIYPHKPAAAPKRAAAADEFKQFLEKYNVEMIAIGNGTASRESEEFVASVLK TISREIFYVIVNEAGASVYSASDTARAEFPDLHVEERSAISIARRLQDPLAELIKIDPQAVGVGQYQHDVAQKELTTQLD VVIEDVVNSVGVNLNTASPQLLQHISGLSATTAQNIVQYRNENGLYQKRSELKKVPRLGPKAFEQAVGFLRIIGGDNPLD NTDIHPESYPVAKAILKSLGVTLEALGTPKLSAAIKQLTVTDLATELAVGSETLEDILSGLQKPGRDLRDQMTAPLLRHD VLTLADLKPNMALEGTVRNVIDFGAFVDIGVKHDGLVHISQLANHFVKHPSDEVSVGDVVQVWVLSVDQERERVQLTMKA PKATD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 2e-139 | 45 |
