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Name : LSA1511 (LSA1511) Accession : YP_396125.1 Strain : Lactobacillus sakei 23K Genome accession: NC_007576 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein, chain length determination Function : - COG functional category : D : Cell cycle control, cell division, chromosome partitioning COG ID : COG0489 EC number : - Position : 1486375 - 1487121 bp Length : 747 bp Strand : - Note : - DNA sequence : ATGGGATTATTTAGAAAAGAAAAAAAACTAGATCAAGATAGTATGAAAGAGGGCGTGGGGTTAATTACTTTAACTTCACC AACTTCAGTGATTGCTGAACAATTCCGGACAATTCGGACGAATATCCAATTCTCATCAATTGATCAGAAATTAAGAAGTA TCGTCTTTACATCATCAGGTCCCTCACAAGGGAAATCAACAATTAGTGCCAATGTGGCAGTTACTTGGGCCGATCAAGGG GTTAATGTATTGTTAGTGGATGCGGACATGCGTCGTCCAACAATACATCAAACCTTCCAAGTGCCTAACAAAAAAGGTTT AACATCGCTATTAACAGAAGATGAATTCGATTTTAACACGACGATTCAAAAAACACCGGTTGAACATTTGTTTGTTTTGC CTTGTGGGGTAGTACCACCTAATCCATCTGAATTATTAAATACGAAGAAGATGGATAAGTTAATTGTTGAATTGACAAAA CACTTTGATCTTGTCATTTTTGATGCACCGCCCGTAATCTCAGTGACAGATGCACAAATCTTAGCAAGTAAAGTGGATGG GACGATTTTAGTGGCACCACAAGGAATTGCCGATAAGCGCTCTGTCATTAAATCTAAAGAATTATTAGATGTAGTTCACG CACGGATCTTGGGGACGATCATGAATCGCGTGAAACCAGAGAATACAGGCGGTTACTACGGTGGCTATTATGGTGGTTAC TATGGTGCAGAAGAATCTAAGAAATAG Protein sequence : MGLFRKEKKLDQDSMKEGVGLITLTSPTSVIAEQFRTIRTNIQFSSIDQKLRSIVFTSSGPSQGKSTISANVAVTWADQG VNVLLVDADMRRPTIHQTFQVPNKKGLTSLLTEDEFDFNTTIQKTPVEHLFVLPCGVVPPNPSELLNTKKMDKLIVELTK HFDLVIFDAPPVISVTDAQILASKVDGTILVAPQGIADKRSVIKSKELLDVVHARILGTIMNRVKPENTGGYYGGYYGGY YGAEESKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1B | AAA64641.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-37 | 41 |
| SSP0061 | YP_300151.1 | capsular polysaccharide synthesis protein | Not tested | SCC15305cap | Protein | 3e-36 | 41 |
