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Name : clpE (LSA1465) Accession : YP_396074.1 Strain : Lactobacillus sakei 23K Genome accession: NC_007576 Putative virulence/resistance : Virulence Product : ATPase/chaperone ClpE, specificity factor for ClpP protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1440481 - 1442646 bp Length : 2166 bp Strand : + Note : - DNA sequence : ATGCTTTGTCAAAATTGTCAAAAAAATCCAGCAACAATCCATCTCTACACTAGCGTCAATGGTCAAAACCAAGCCATTAA CCTTTGTCAAAACTGTTATCAAGCACTAAAGCAACAAGGAATGAGTGGTCAATATAATGATCCCTTTGGTTTTAGTAATC TTGATGAACTCTTCAATGCAATCAACAATCCAAACGCTGAACGCAATGCTGCTAACCAAGGCCCCCAAACACAAGGTGGC CGTAATGGCGGCGGTAACAACGGTCAAAATGGTGAAAGTCTACTCAGCCAATTTGGTGTGAACCTCACCAACCTTGCTAA GGGTGGTCAAATTGATCCGGTGATTGGTCGCGATAAGGAAATCGCGCGCGTCATCGAAATTCTCAATCGGCGTACCAAGA ATAATCCAGTCTTAATTGGTGAAGCCGGCGTTGGTAAAACAGCCGTTGTCGAAGGTTTAGCGCAAAAAATTGCCGATGGC GACGTTCCTGCTAAATTAAAGGATCGCCAAGTGATTCGCTTGGATGTCGTTTCATTAGTACAAGGGACTGGTATTCGCGG TCAATTTGAAGAACGGATGCAACAGTTGATCACTGAGCTCAAACAAAATAAGCAGATTATCCTCTTTATTGATGAAATTC ACGAAATCGTTGGCGCCGGCAATGCTGAAGGCGGCATGGATGCTGGTAACGTGTTGAAGCCAGCTCTTGCGCGTGGCGAA TTACAACTCGTTGGCGCCACAACTAATAATGAATTCCGTCAGATTGAAAAAGACGCAGCCCTTGCACGTCGTCTTCAACC GGTCGCGGTCAACGAACCATCTGTTGACGAAACCGTTCTAATTCTCAAAGGGCTTCAAGATAAATACGAAAGTTATCACC ACGTTCACTATACGGACGAGGCGCTTAAAGCAGCAGCGGCCCTTTCTAGTCGTTATATCCAAGATCGTTATTTGCCTGAT AAGGCTATCGACCTTTTGGATGAAGCAGGCTCTAAGAAAAACTTGACGATTACCTTGATGGATCCTAAGGAATTAGAAGC CAAGATTAAATCTGCAGAAGCACAAAAACAAGAAGCCCTCAAACAAGAAGATTACGAAAAAGCAGCTACCTATCGTGATC AAGTCACACAGCTCTCTGAAATGAAAGCTAATAATTCAGTTGAAAAATCCCAAGAACCAACAATCACCGAAAAGGATATG GAAAAAATTGTCGAAGAAAAAACCCATATTCCAGTTGGCGAATTAAAGGCGCAAGAACAAGCTCAACTTAAAAACTTAGC GCAAGATCTTGAAGCACATGTCATTGGTCAAGATACCGCAGTTGATAAAGTCGCTCGTTCAATTCGTCGTAGTCGAATTG GCTTTAATAAATCCGGCCGACCAATTGGCTCCTTCCTCTTTGTTGGCCCAACCGGGGTTGGTAAAACGGAATTAGCCAAA CAAATTGCCAAAGAACTCTTTGGCAGTACCGATGCGATGATTCGCTTTGATATGAGTGAATACATGGAGAAATTCAGTGT GTCAAAATTGATTGGTTCACCTCCTGGCTACGTTGGTTACGAAGAAGCCGGGCAATTAACGGAACAAGTTCGTCGGAACC CTTATAGTTTGATTCTTTTGGATGAAATCGAAAAGGCTCACCCTGACGTTATGCACATGTTCTTACAAATTCTAGATGAC GGTCGTCTAACCGATTCACAAGGTCGGACTGTCAGCTTCAAAGACACAATCATTATCATGACGTCTAACGCTGGACAAAC TGATGCTGAGGCTAACGTTGGTTTCGGTGCAGCTGTCGCTGGCCAAACCCATTCAATTCTCGATCAGTTAACGAACTACT TTAAACCAGAATTCTTAAATCGTTTCGACGATATTATTGAATTCCAACCATTAAGTAAAGATAATCTATTAAAGATTGTC AGCTTAATGCTTGATCAAACTAACGCGATGATTGCCGATCAAGGCCTCCACATTGCTGTGACGGATGACGCTAAATCTAA ATTAGTCGATTTGGGCTACAACCCTGAAATGGGTGCTCGGCCACTACGTCGTGTCATTCAAGAACAAATTGAAGACCGCG TTGCTGATTATTATTTAGATCATCCAGAACATAAGCAATTAAAAGCGCAGTTAAATGATGATCAGATTCAAATTGTGCAA GGATAA Protein sequence : MLCQNCQKNPATIHLYTSVNGQNQAINLCQNCYQALKQQGMSGQYNDPFGFSNLDELFNAINNPNAERNAANQGPQTQGG RNGGGNNGQNGESLLSQFGVNLTNLAKGGQIDPVIGRDKEIARVIEILNRRTKNNPVLIGEAGVGKTAVVEGLAQKIADG DVPAKLKDRQVIRLDVVSLVQGTGIRGQFEERMQQLITELKQNKQIILFIDEIHEIVGAGNAEGGMDAGNVLKPALARGE LQLVGATTNNEFRQIEKDAALARRLQPVAVNEPSVDETVLILKGLQDKYESYHHVHYTDEALKAAAALSSRYIQDRYLPD KAIDLLDEAGSKKNLTITLMDPKELEAKIKSAEAQKQEALKQEDYEKAATYRDQVTQLSEMKANNSVEKSQEPTITEKDM EKIVEEKTHIPVGELKAQEQAQLKNLAQDLEAHVIGQDTAVDKVARSIRRSRIGFNKSGRPIGSFLFVGPTGVGKTELAK QIAKELFGSTDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEQVRRNPYSLILLDEIEKAHPDVMHMFLQILDD GRLTDSQGRTVSFKDTIIIMTSNAGQTDAEANVGFGAAVAGQTHSILDQLTNYFKPEFLNRFDDIIEFQPLSKDNLLKIV SLMLDQTNAMIADQGLHIAVTDDAKSKLVDLGYNPEMGARPLRRVIQEQIEDRVADYYLDHPEHKQLKAQLNDDQIQIVQ G |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-152 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_396074.1 | ATPase/chaperone ClpE, specificity factor for ClpP protease | VFG0080 | Protein | 0.0 | 60 |
| clpE | YP_396074.1 | ATPase/chaperone ClpE, specificity factor for ClpP protease | VFG0079 | Protein | 1e-157 | 52 |
