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Name : atkB (LSA1460) Accession : YP_396069.1 Strain : Lactobacillus sakei 23K Genome accession: NC_007576 Putative virulence/resistance : Resistance Product : copper-transporting P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 1435292 - 1437331 bp Length : 2040 bp Strand : - Note : - DNA sequence : ATGAAACACGATGATATGAAGATGCACGATATGCATGATATGGACCATGATCACGGCGATATGATGATGCATGGTGGACA TATGATGCACATGGGTAATTTGAAACAGAAATTCTGGGTCTCATTAGTCGCAACAATTCCCATTATTATATTATCGCCTT TTATGGGAATTAAATTACCGTTTCAAACCACGTTCCCAGGATCGGATTGGTTAGTCCTCTTATTAGCAACCTTCCTATTC TTTTACGGCGGCGCGCCTTTCTTAAAAGGTGCAAAGGGCGAATTGGCCGAGAAGAACCCAGCGATGATGACGTTGATTGC GATGGGGATTACGGTATCGTACGGTTATAGTTTATATGCTTTTATTGCCAACCATTTCTTGGCAACACAAACGCACGTGA TGGATTTTTTCTGGGAACTGGCAACGTTAATCGTTATCATGTTGTTAGGTCACTGGATTGAAATGAACGCCGTTATGAGC GCTGGGAGTGCGATGGAGAAGATGGCCGCCTTATTACCTGGCCAAGCACAAGTCCTCGATCAAGATGGTCAGCAACACGC TGTTGATTTGAAGGATTTACAAGAGGGCCAAACCGTGTTGGTGGCAGCAGGCGAAAAAGTCCCAGCGGATGGTCTTGTGG TGAATGGTCAAAGTCAGGTGAACGAATCATTGGTGACTGGTGAAGCCAAAGCAGTTGCTAAAAAGACTGGCGACCAAGTA ATTGGTGGAACAGTCAATGGCGACGGGACATTAACCGTTAAAGTCAAGGGGACTGGTGAGAGTGGTTATTTAGCGCAGGT GATGAAGTTAATCAAACAAGCACAACAAGAAAAGTCAAAGGTCGAAGGGTTGGCCGATAAGGTCGCTAAATACCTTTTCT ACGCAGCATTAGTGGCTGGTATTATTGCTTTTATCAGTTGGTTTTTCTTAGCTGATTTAAATACTGCATTTGAACGAATG GTGACGGTCTTCATTATCGCTTGTCCGCATGCACTTGGTTTAGCGATTCCATTAGTTGTTGCTCGAAGTACAGCGATTGC GGCAACTAACGGCTTATTAATTCGTAATCGCCAAGCAATTGAAGTGGCAGATCAAATTACGATGGTTTTAATGGATAAAA CAGGGACATTGACGCAAGGGGCTTTTAAGGTCAATGCGGTTCAACCAACTGGCGAGATGTCAAAAACTCAATTGATGGCT TATATGGGTGCTTTGGAACGACACTCAAGTCATCCATTGGCAACTGGGATTTTAGCTTATAATGACGCTGAAAAAATTAC GATGTCCCAAGCTGAAAATGTACAAACGATTCAAGGAATCGGGCTGACAGGCGCAATTGAAGGGCAAACTTATCAAATCG TTACGGCCGATTATCTACAAGAAAAGCAAATCGCATTTGATACGGCAGCCTTTGAAACTTTGGCGGCTAAAGGTAATTCC ATTAGTTATCTAATTCAAGGTCAAACTGTCTTAGGATTGGTCGCGCAAGGGGATCAGTTGAAACCAGAAGCACTGACGTT CATCAAGGCATTGAAAAAGCGTCATATCCAACCGGTGATGTTGACTGGGGATAATCAACAGGTTGCCGAAAAGGTGGCGC AACAATTGGGTGGTATGACAGTTCAAGCTAATTTGAAGCCAGAAGATAAGGAAGCACTTGTACAAGATTACCAAGCAAAG GGTGAAGTGGTCTTGATGGTTGGCGATGGTGTCAACGATGCCCCTAGCTTGACGCGAGCTGATATTGGGATTGCGATTGG TGCGGGCACGGATGTCGCAATTGATTCCGCAGATGTGATTTTGGTTAAGAGTAATCCGAACGATATCATGCATTTCTTGA ATTTAGCACATGCTACTAGTCGGAAGATGACGCAAAACCTTTGGTGGGGAGCTGGTTACAACATTTTAGCAATTCCATTG GCGGGTGGCTTATTTGCCGCTTGGGGCTTAATTTTAAGTCCAGCGATTGGTGCCATCTTGATGTCGCTTTCAACAATTGT CGTGGCAATTAATGCGATGACATTAAAATTAAAAAATTAA Protein sequence : MKHDDMKMHDMHDMDHDHGDMMMHGGHMMHMGNLKQKFWVSLVATIPIIILSPFMGIKLPFQTTFPGSDWLVLLLATFLF FYGGAPFLKGAKGELAEKNPAMMTLIAMGITVSYGYSLYAFIANHFLATQTHVMDFFWELATLIVIMLLGHWIEMNAVMS AGSAMEKMAALLPGQAQVLDQDGQQHAVDLKDLQEGQTVLVAAGEKVPADGLVVNGQSQVNESLVTGEAKAVAKKTGDQV IGGTVNGDGTLTVKVKGTGESGYLAQVMKLIKQAQQEKSKVEGLADKVAKYLFYAALVAGIIAFISWFFLADLNTAFERM VTVFIIACPHALGLAIPLVVARSTAIAATNGLLIRNRQAIEVADQITMVLMDKTGTLTQGAFKVNAVQPTGEMSKTQLMA YMGALERHSSHPLATGILAYNDAEKITMSQAENVQTIQGIGLTGAIEGQTYQIVTADYLQEKQIAFDTAAFETLAAKGNS ISYLIQGQTVLGLVAQGDQLKPEALTFIKALKKRHIQPVMLTGDNQQVAEKVAQQLGGMTVQANLKPEDKEALVQDYQAK GEVVLMVGDGVNDAPSLTRADIGIAIGAGTDVAIDSADVILVKSNPNDIMHFLNLAHATSRKMTQNLWWGAGYNILAIPL AGGLFAAWGLILSPAIGAILMSLSTIVVAINAMTLKLKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0105 | YP_252020.1 | hypothetical protein | Not tested | SCCmec | Protein | 2e-143 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| atkB | YP_396069.1 | copper-transporting P-type ATPase | BAC0079 | Protein | 0.0 | 59 |
| atkB | YP_396069.1 | copper-transporting P-type ATPase | BAC0383 | Protein | 2e-146 | 49 |
| atkB | YP_396069.1 | copper-transporting P-type ATPase | BAC0629 | Protein | 5e-130 | 46 |
