Gene Information

Name : LSA0154 (LSA0154)
Accession : YP_394763.1
Strain : Lactobacillus sakei 23K
Genome accession: NC_007576
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 149540 - 149746 bp
Length : 207 bp
Strand : -
Note : -

DNA sequence :
GTGATTCAAAATCGCATTAAAGTCTTACGCGCTGAGCGCAACTGGACCCAGGCTGACCTCGCCGAACGAACCGGCATTTC
CAGGCAAGCCGTGATTTCAATCGAAAAGTATAAATATACACCCTCATTAGAACTCGCTTTTAAGATTGCGCAGGTCTTTG
GGGTCGAAATAACAACTGTCTTTTCACCAGAGGAGGATTCAAAATGA

Protein sequence :
MIQNRIKVLRAERNWTQADLAERTGISRQAVISIEKYKYTPSLELAFKIAQVFGVEITTVFSPEEDSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-06 41
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-06 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LSA0154 YP_394763.1 XRE family transcriptional regulator VFG2175 Protein 9e-07 41
LSA0154 YP_394763.1 XRE family transcriptional regulator VFG2168 Protein 9e-07 41