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Name : polA (LSA1406) Accession : YP_396016.1 Strain : Lactobacillus sakei 23K Genome accession: NC_007576 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : 2.7.7.7 Position : 1371955 - 1374615 bp Length : 2661 bp Strand : - Note : - DNA sequence : ATGGGTTCTCAAAAAAGTTTATTATTAATTGATGGTAACAGTGTAGCGTTTCGGGCGTTTTACGCGATGCACCAAGTGTT AGATAGTTTTACCAATCAAGATGGGTTACACACCAATGCCATTTATGCGTTTAAAAACATGCTAGATATTATTTTGAAAC GGTTTGAACCAACACACGTCTTAGTGGCTTTTGATGCGGGCAAAACGACTTTTAGAACGGCACAGTTTGCCGACTATAAG GGCGGTCGTTCTAAGACGCCACCAGAATTAACGGAACAGTTTCCTTATATCAAGGAATTATTGCATGCTTATGGCATTCA GACGGCTGAATTAGCCAACTATGAAGCTGATGATATTATTGGGACGTTGGCGAGCCAAGCAGAACAAGACGGCTTTGTTG TCAATATCGTGACGGGTGATCGTGATTTAACACAACTAACGACGGATAAAACGACCGTTAATATCACAGTCAAAGGTGTC AACGATACAGAAGCCTACACACCGGAACATGTACAAGAAAAATTAGGCTTAGCACCTAGTCAAATCGTAGACTTAAAAGG TTTGATGGGTGATACCTCTGATAATTATCCGGGTGTCACAAAGGTCGGCGAAAAGACAGCGCTGAAACTCTTAACGGAAT TTGGGAGCATCGAAGGGGTCTACGAAAATGTCGATGCAATGAAAAAGAGTAAGATGAAAGAACATCTGATTGAAGATCGT GATCAAGCCTTTATGAGCAAAAAATTGGCGACGATTTTGCGGGATGCACCGATCGAAACGACGTTAGCAGACATCACGTA TGAAGGTCCCAACATCGATACGTTGATTGCTTTTTATCAAGAAATGAACTTTCAAAACTTTTTAAAGCAATTAAACGTGA CACCAGAAGCGGTTGAACCGGCGGAAAACTATCAATATACTGTTTTGACGTTGGATAATTTAGAAACCGTTCAAGCGATT AAAACACCGGTTGCCTTCGGGGTTGAAATGTTAACCGATAATTATCACACAGCCGATTTAATTGGTTTTTATATCGGCGC ACCAGATCATTGGTATGTCAGTGATGATGTTGCACTACTAGCTGAACCAGTATTGAAGGATTGGTTGGAAGATGCGAGTC ATCCTAAAGCAGTCTTCGGTGTCAAACGGACACAAGTCGCAGCTAATCGATTAGGGGTTCATTTAGCCGGCGTTGATTTC GATTTATTATTAGCATCCTATTTATTGAATACGACGAATAACAGCAACGATTTAGGGACGGTCGCTAATTTACACGAGTA TCAAAATGTGCAAACAGACGAGGCCGTTTATGGGAAAGGTGCTAAACGGGCTGTTCCAACTGAACCAGCTTTGTTGTATC AACATTTGGTTCAAAAAGCGGCAGCCATTTATCATTTACAACCACAACTTGAAGAACAATTGAAGGAACATCAACAATTC GATCTCTTTACGGATATGGAATTACCATTGGCCCTTGTATTGGCGCAAATGGAAATAACCGGGATTCGGGTCGATGCCAG TCGCCTCCAACAAATGGGGTCAGAATTCAGCCAAACCTTGAAGATCTTGGAAGAAAAAGTTTACGCTGAAGCTGGCGAAA CCTTCAACATTAACTCACCTAAGCAACTGGGCGTTATTTTATTTGAAAAAATGGGCTTACCAGTGGTTAAGAAGACGAAG ACGGGCTATTCAACCGCTGTTGATGTACTTGAACAATTACGGAAGGATGCACCAATTGTCCAAACAATTTTGGATTATCG TCAAATTGCCAAGATTCAATCAACGTATGTCGAAGGGTTATTGAAATCAATCCATCAAGATAATAAGGTCCATACGCGTT ACTTACAAACCTTGACGCAAACTGGCCGTTTATCGTCGGTTGATCCTAACCTACAAAACATTCCAGTTCGTTTGGCAGAA GGCCGCAAGATTCGCCAAGCCTTTGTTCCAAGTCACCCAGACTGGCAAATGTTTGCTTCTGATTACTCGCAAATCGAATT ACGAGTATTAGCACACATCTCAGGGGATGCCAACATGCAAGAAGCCTTTAAAGAAGACCGGGATATTCATGCAAATACAG CGATGAAGATCTTTGGTTTAAATAGTGCCGATGAAGTGACACCAGATATGCGGCGCCAAGCTAAAGCTACGAATTTCGGG ATTGTTTACGGGATTAGCGATTATGGCTTATCTCAAAATATCGGCATTTCGCGGCAAGAAGCCAAACGTTTTATCGACGC TTATTTCGAACAATATCCAGGTGTCCAACAATTCATGGTTGATATTGTTAAAAAAGCGCGTGAAGAAGGCTATGTCGAAA CGCTTTTCCACCGTCGTCGTTATTTACCAGATATTCACGCTAAGAACTTTAACCTCCGTTCTTTTGCAGAACGGACAGCG ATGAATACGCCAATTCAAGGTAGTGCTGCGGATATTATCAAGGTGGCGATGATTTTAATGCAACAAGAATTGAAGAAGGC GAACTTGCAAGCCAGAATGTTATTACAAGTACATGATGAATTGATTTTTGAAGCACCAACTGAAGAAATACCAATCTTAC AAAAATTAGTCCCAAGTGTGATGGATTCAGCCGTTAAATTAGCGGTGCCATTGAAGGTCGAAAGTGGTTTTGGCCCAACT TGGTACGATATTAAGAAATAA Protein sequence : MGSQKSLLLIDGNSVAFRAFYAMHQVLDSFTNQDGLHTNAIYAFKNMLDIILKRFEPTHVLVAFDAGKTTFRTAQFADYK GGRSKTPPELTEQFPYIKELLHAYGIQTAELANYEADDIIGTLASQAEQDGFVVNIVTGDRDLTQLTTDKTTVNITVKGV NDTEAYTPEHVQEKLGLAPSQIVDLKGLMGDTSDNYPGVTKVGEKTALKLLTEFGSIEGVYENVDAMKKSKMKEHLIEDR DQAFMSKKLATILRDAPIETTLADITYEGPNIDTLIAFYQEMNFQNFLKQLNVTPEAVEPAENYQYTVLTLDNLETVQAI KTPVAFGVEMLTDNYHTADLIGFYIGAPDHWYVSDDVALLAEPVLKDWLEDASHPKAVFGVKRTQVAANRLGVHLAGVDF DLLLASYLLNTTNNSNDLGTVANLHEYQNVQTDEAVYGKGAKRAVPTEPALLYQHLVQKAAAIYHLQPQLEEQLKEHQQF DLFTDMELPLALVLAQMEITGIRVDASRLQQMGSEFSQTLKILEEKVYAEAGETFNINSPKQLGVILFEKMGLPVVKKTK TGYSTAVDVLEQLRKDAPIVQTILDYRQIAKIQSTYVEGLLKSIHQDNKVHTRYLQTLTQTGRLSSVDPNLQNIPVRLAE GRKIRQAFVPSHPDWQMFASDYSQIELRVLAHISGDANMQEAFKEDRDIHANTAMKIFGLNSADEVTPDMRRQAKATNFG IVYGISDYGLSQNIGISRQEAKRFIDAYFEQYPGVQQFMVDIVKKAREEGYVETLFHRRRYLPDIHAKNFNLRSFAERTA MNTPIQGSAADIIKVAMILMQQELKKANLQARMLLQVHDELIFEAPTEEIPILQKLVPSVMDSAVKLAVPLKVESGFGPT WYDIKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 55 |
