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Name : treC (LSA1199) Accession : YP_395811.1 Strain : Lactobacillus sakei 23K Genome accession: NC_007576 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate phosphoglucohydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 1179382 - 1181031 bp Length : 1650 bp Strand : - Note : - DNA sequence : ATGAAATGGTGGCAAAAAGCAACAGTTTATCAAATTTATCCGCGGAGTTTTCAAGATTCAAATGGTGATGGTATCGGTGA TATCAACGGGATTATCCAACGTTTAGATTATTTACAAGATTTGGGGATTGAATTAATCTGGTTAACACCGATGTATGTCT CACCAGGTCGGGATAATGGGTATGATATTGCGGATTATTATCAAATCGATCCAATTTTTGGTGACTTAGCTGATTTTGAA CGGCTTTTGAAGGAGGCTCATCAACGGGGGATTAAAATTATGATGGATATGGTGGTCAACCATACTTCAGATCAACACCG TTGGTTCCAAGAAAGTTTGAAGGGCAAGGACAATCCTTATCACGATTATTATTTATGGCGTGATCCAGTTGATGGTCATG AACCGAATAACTGGTTATCTAAGTTTAGTGGTAGTGCTTGGGAGTATGTCCCCGCGCTAAATCAGTATTACTTACATTTA TACGAGAAGCGGATGCCTGATTTAAACTGGCGAAATCCACAATTGCGTGAAGAAATCTATCAAATGATGCAGTTTTGGGC TGATTTAGGGATTGATGGTTTACGGTTAGATGTGATCAATAACATCTCGAAGGATAAAGATTTTCCAAATGATACTTTCG AGACACCGAGTGACGATGGCCGTAACTTTTATACCAACGGTCCGCACGTTCACGAATATATTCATGAAATGTATGAACGC GTCTTTGGCCCTAACAACTTTGTGACGGTTGGTGAATTATCATCAACGCCGGTTTCAGAAGCAATTCGTTATACGAACCC AGAACGTGAAGAACTCTCGATGGCATTTACCTTCCACCACGTTAAAGTCGATTATACGGGTGGTAAAAAGTGGACGCTAG GGCAGTACCGTCTGTCTGATTTGAAGCGGATTTTAAGTCAATGGCAAACTGAAATGGCAGCAGGTGGTGGCTGGAATGCA TTATTCTGGTCAAACCACGATCAACCACGGGCGATTTCACGGTTCTTAGACGATGGTCAGTATCGTGATCAATCCGCTAA GTTATTGGCATTAGTTGAATTTGGGTTACAAGGCACACCGTATATTTATCAAGGGGAAGAAATTGCGATGAAGAATGCTA ATTTCACTTCGATTGATCAATATCAAGATGCTGAATCGATTAACGCATATCACCAAATGTTAGCTGATGGGATTAGTGAA GATTTGGCGATTAAAATCCTACAACAAAAATCGCGTGAAAATTGTCGGATTCCAATGCAATGGGATATGACTGCCAATCA CGGCTTTACAACTGGTATGCCTTGGTTGCAACCAGTTGTTGCGGATGATTATTCGGTGGCGACTAAAGCACAAGCACCAG ATAGTGTCTTTGCCTTTTACCAACAATTAGTAGCGCTACGTAAGACTGAACCTGTCCTTATTGAAGGCCAATATCAATTA TTGGCACCAGAAGATGAAGCGGTTTATACTTATCAACGACAGTTAGGTGATAAAAAAGTCCGTGTGATCGCAAACTTTAC AGATCAAACGCAACAACGCGCTAACGCGGCCGTTAAAGCGGTGATGATGAGTAATTATCCAGACCAACAATTAACGACCG ACCAAATTACATTACGACCATATGAAGCCGTTATGCTAGAAATTGAATAA Protein sequence : MKWWQKATVYQIYPRSFQDSNGDGIGDINGIIQRLDYLQDLGIELIWLTPMYVSPGRDNGYDIADYYQIDPIFGDLADFE RLLKEAHQRGIKIMMDMVVNHTSDQHRWFQESLKGKDNPYHDYYLWRDPVDGHEPNNWLSKFSGSAWEYVPALNQYYLHL YEKRMPDLNWRNPQLREEIYQMMQFWADLGIDGLRLDVINNISKDKDFPNDTFETPSDDGRNFYTNGPHVHEYIHEMYER VFGPNNFVTVGELSSTPVSEAIRYTNPEREELSMAFTFHHVKVDYTGGKKWTLGQYRLSDLKRILSQWQTEMAAGGGWNA LFWSNHDQPRAISRFLDDGQYRDQSAKLLALVEFGLQGTPYIYQGEEIAMKNANFTSIDQYQDAESINAYHQMLADGISE DLAIKILQQKSRENCRIPMQWDMTANHGFTTGMPWLQPVVADDYSVATKAQAPDSVFAFYQQLVALRKTEPVLIEGQYQL LAPEDEAVYTYQRQLGDKKVRVIANFTDQTQQRANAAVKAVMMSNYPDQQLTTDQITLRPYEAVMLEIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 4e-122 | 48 |
