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Name : XerD (LSA1028) Accession : YP_395639.1 Strain : Lactobacillus sakei 23K Genome accession: NC_007576 Putative virulence/resistance : Unknown Product : site-specific DNA tyrosine recombinase, XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1016756 - 1017640 bp Length : 885 bp Strand : - Note : - DNA sequence : TTGGATGATCTAATTCAAGATTATTTACATTATCTGAAGATTGAACGCGGCCTTTCTGAAAATACGCGTCAGAGTTACCG GCAAGATTTGAAACAGTATCAGCAGTTTTTAGTGTCACAAAAATTGACGTCTTTTACGGAAGACCGATTTATTGTTTTGG GTTTCTTACAGGCCCAAACGACGGCCCAAAAGGCGCAAAGCAGTATCACGCGTAGTATTTCGACATTGCGTAAATTCTAT CAATATTTAGCGCGTGAGGGACGTATTCAAAAAGACCCGATGCTGCAGATTGATTCCCCGAAGCAAGGCCGGCATCTGCC GGCTGTTTTATCATCAGAAGAGATTGAACGTTTGTTAAAGACACCGGACACGAGTACACCATTAGGCCTTCGTGACCGGG CAATCCTTGAAGTCTTGTATGCGACTGGTTTGCGGGTTAGTGAACTGGTTCATCTGAAATTGACGGATTTGCATTTATCT CTGGGGTTAATTCAGACCCTAGGTAAGGGAGATAAGGAGCGGATTATTCCGATCGGCGATGTTGCGGTGGACTGGATTAA TCAATATCTAGAACGTAGCCGCAATCGGTTAACCAAGGGCAAGGATTCACCTTATTTGTTCGTCAATTTTCACGGAAACG GGTTAACAAGACAAGGCATTTGGAAGAATTTAAAAGCCATTGTCCAGGCCGCAGGAATTGATAAAGATGTGACACCACAT ACATTGCGGCATTCTTTTGCGACTGTTTTGCTTGAAAATGGTGCTGACTTGCGAATTGTGCAGGAGTTATTGGGCCATTC TGATATTTCAACCACCCAAATTTATACGCATATCAGTAAGAAACATCTCACGGAAGTTTATCAGAGAAGTCATCCGCGTG ATTAG Protein sequence : MDDLIQDYLHYLKIERGLSENTRQSYRQDLKQYQQFLVSQKLTSFTEDRFIVLGFLQAQTTAQKAQSSITRSISTLRKFY QYLAREGRIQKDPMLQIDSPKQGRHLPAVLSSEEIERLLKTPDTSTPLGLRDRAILEVLYATGLRVSELVHLKLTDLHLS LGLIQTLGKGDKERIIPIGDVAVDWINQYLERSRNRLTKGKDSPYLFVNFHGNGLTRQGIWKNLKAIVQAAGIDKDVTPH TLRHSFATVLLENGADLRIVQELLGHSDISTTQIYTHISKKHLTEVYQRSHPRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 3e-56 | 44 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 3e-56 | 44 |
