Gene Information

Name : Suden_0942 (Suden_0942)
Accession : YP_393455.1
Strain : Sulfurimonas denitrificans ATCC 33889
Genome accession: NC_007575
Putative virulence/resistance : Unknown
Product : Type I restriction-modification system M subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 981903 - 983390 bp
Length : 1488 bp
Strand : +
Note : -

DNA sequence :
ATGCAAAAAACGACTCAAAGCACAATCAACAATGTAGTATGGAAAGCTTGCGATACATTCAGAGGTACGATGGATGGAAG
TGATTATAAAGATTATGTTCTTACAATGCTATTTGTGAAGTATCTTTCTGATTTTTACAAAGAGAAACTTGACCTTCTGA
AAGCAGAGTACGGTGATAAGACGGATAGAATCGAAGCAAAGCTAAAAAGAGAAAAATTCAGACTTGATGAGAGTTGCACA
TTTGATTATTTGATTAAACACAAAGAGGCTCCAAACCTTGGTGAGATAATGAATAAAGTGCTTGAGAGAATCGAAGAGGA
CAATAGAGATAAACTAGAAGGTATCTTTAGAAGCATAGACTTCAACAACAAAAACAAACTAGGTGACACTAAAGAGAGAA
ATACAATACTCAAAAATCTTATTGAAGATTTTAGTGACACAAGACTTGATCTAAGACCTTCAAGGTTAGAGGGCAATGAT
GTCATCGGAGATGCTTATGAATATCTTATCTCACACTTTGCAAGTGATGCTGGAAAAAAAGGTGGAGAGTTTTATACTCC
AAGCGAAGTATCAACTCTTTTAGCAAAACTAGTTGAACCAAAAGAGGGAGAGATGATCTATGACCCTACATGTGGTTCTG
GTTCACTCCTTATAAAAGCATCAAAAGAGATAGGAAGTAAAAACTTCCGTCTTTATGGGCAAGAGAAAAACGGACAAACT
CAAGCACTTTGTAAGATGAATATGTTTTTGCATGAGATAAACGATGCAGTTATCGAGTGGGGAGATACTATAAGAAATCC
ACTACATCTACAAGATAATCTTCTTAAGACTTTTGATGTCGTAGTAGCCAACCCACCGTTTAGCCTTGATAAATGGGGTG
AAGAGATTGCCTCTGATGATAGCTTTGGAAGGTTCAAATATGGAACACCACCAAAAAGCAAAGGGGATTATGCTTTTGTA
TTACACATGATAAGCTCTCTTAATTCTCATGGGAAAATGGGAGTTATATTACCTCATGGGGTACTCTTTAGAGGAGCAAG
TGAAGGGAAAATCAGAGAAAAACTAATCGAGCAAAACTTACTTGATACAGTTATTGGACTTCCTTCAAATCTCTTTTTTG
GAACTTCAATCCCTGCATGTATTTTGATATTCAAAAAAAATAGAGTTCATAATGATATTCTTTTTATCGATGCAAGTCGT
GAATTTGAAAAAGGGAAAAATCAAAACAACCTTACAGATGAGCATATAGCAAAGATATTTGATACTTATAAAAATAGAAG
TGAGATAGAGAAGTACTCACATGTAGCGACACTAGAAGAGATACAAGAAAATGACTATAACCTAAATATCCCTAGATATG
TAGATACATTTGAAGAAGAGGAAATCATCGATTTAGATGCTACCAAAACAAATATAGCAACTATTGAAATTGAGTTAGTA
GAGATAAAATCTAAAATGAATGGGTATCTAAAAGAGTTGGGGCTATAA

Protein sequence :
MQKTTQSTINNVVWKACDTFRGTMDGSDYKDYVLTMLFVKYLSDFYKEKLDLLKAEYGDKTDRIEAKLKREKFRLDESCT
FDYLIKHKEAPNLGEIMNKVLERIEEDNRDKLEGIFRSIDFNNKNKLGDTKERNTILKNLIEDFSDTRLDLRPSRLEGND
VIGDAYEYLISHFASDAGKKGGEFYTPSEVSTLLAKLVEPKEGEMIYDPTCGSGSLLIKASKEIGSKNFRLYGQEKNGQT
QALCKMNMFLHEINDAVIEWGDTIRNPLHLQDNLLKTFDVVVANPPFSLDKWGEEIASDDSFGRFKYGTPPKSKGDYAFV
LHMISSLNSHGKMGVILPHGVLFRGASEGKIREKLIEQNLLDTVIGLPSNLFFGTSIPACILIFKKNRVHNDILFIDASR
EFEKGKNQNNLTDEHIAKIFDTYKNRSEIEKYSHVATLEEIQENDYNLNIPRYVDTFEEEEIIDLDATKTNIATIEIELV
EIKSKMNGYLKELGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 7e-92 43
ORF6 BAC22943.1 - Not tested etd PI Protein 4e-93 43
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 1e-93 43
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 1e-93 43
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 2e-93 43
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 8e-94 43
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 7e-94 43
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 7e-94 43
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 1e-93 43
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 5e-92 43
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 7e-94 43
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 1e-93 43
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 3e-92 43
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 7e-94 43
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 1e-93 43
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 3e-93 43
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 6e-94 43
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 1e-93 43
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 2e-93 43
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 2e-93 43
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 2e-93 43
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 2e-93 43