Gene Information

Name : hemC (Suden_0863)
Accession : YP_393376.1
Strain : Sulfurimonas denitrificans ATCC 33889
Genome accession: NC_007575
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 889942 - 890883 bp
Length : 942 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGAAAAAATTAGTAATAGCAACAAGAGGATCTCAACTAGCACTTTGGCAGTCAAATCATATAAAAGCTATTTTACAAGA
GCAAAATCCAGGTCTTGAAGTTGAGTTAAATGTTATCGTTACAACAGGAGACCGTATTCAAGATAAAGCGCTCTCTAAAA
TAGGCGGAAAAGGGCTGTTTTTAAAAGAGCTTGAAGAAGCTATGCTCCAAGGAGAAGCTCAAATTGCAGTTCACTCCCTA
AAAGATGTTCCAACAGTTATGCCTGATGGTCTTATCTTAGCAGCAATCACAGAGAGAGAAGATTCAAGAGATGCACTTTT
ATCAGAAAAATATGCAAATATTGACGCACTGCCTAAAAATGCAGTGGTAGGTACATCTTCTCTTCGCCGTCGTATGCAGA
TACAAAAACTTCGTCCAGATTTAATCATAAAAGATTTAAGAGGCAATGTTGATACAAGAATTAGAAAGCTAAAAGAGGGT
GAATTTGATGCAATTATTTTAGCTGCTGCTGGAATAAATAGACTCTCTTTGCTTGATGCTGTAAAACATGTATATCCTAT
TTCACTTGAAGAGATGGTTCCATCTATGGGACAAGGGGCACTTGGAATAGAAGCGGTAAATGATGCTGAAGTTTTAAGAA
TAGTTGCAGGACTTGAAGATGAGTATAGTAGAATTGAGACAACTATAGAGAGATCTTTTGTTGATGAGTTGGAGGGTGGT
TGCCAAGTTCCAATAGGTGTTAATGCATCTGTTTTAGATGATGGAACTATTAGTATTAGAGCCGTGCTTGGTCTTCCTAA
TGGAGAAGAGATGCTAAGTGATTCAAAGATAACATCTAAGAAAGATTATGAAAACATTGGCAGAGAAATAGCAGCAGAGT
TTATAGAAAAAGGGGCTAAAGAGCTTCTTAGCCGTGCTGAAGCAATGATGGAAAATAAGTAA

Protein sequence :
MKKLVIATRGSQLALWQSNHIKAILQEQNPGLEVELNVIVTTGDRIQDKALSKIGGKGLFLKELEEAMLQGEAQIAVHSL
KDVPTVMPDGLILAAITEREDSRDALLSEKYANIDALPKNAVVGTSSLRRRMQIQKLRPDLIIKDLRGNVDTRIRKLKEG
EFDAIILAAAGINRLSLLDAVKHVYPISLEEMVPSMGQGALGIEAVNDAEVLRIVAGLEDEYSRIETTIERSFVDELEGG
CQVPIGVNASVLDDGTISIRAVLGLPNGEEMLSDSKITSKKDYENIGREIAAEFIEKGAKELLSRAEAMMENK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 5e-64 50
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 5e-64 50