Gene Information

Name : Suden_0317 (Suden_0317)
Accession : YP_392833.1
Strain : Sulfurimonas denitrificans ATCC 33889
Genome accession: NC_007575
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 320521 - 321195 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGCGAATATTAGTTGTTGAAGATGATGAAAAAATTGCATCTTTCATAAAAAAAGGTCTGCAAGAGGAGTCATACAGCGT
TGATGTCACATCTAATGGATATGAAGCTATCTATCTTGTAGAGACTAACTCTTATGATATTGTTTTGCTTGATTTGATGA
TTCATGGACTTGGTGGGATAGATGTCTGTAAAAACATAAGAGGCAAAAACATTGCAACTCCAATCATTATGCTAACAGCT
AGAGATGCGATTAAAGATAAAGTTGAGGGTCTTGATTGTGGCGCAAATGACTACTTAACAAAACCTTTTTCATTTGAGGA
ACTTTTAGCTCGTATCCGTTCCAAACTAAGAACTACCTCAACTCTCTCAAGCACGATAGCTATAGCTGATTTAACTATAA
ATACAGCTCGTCGTGAAGTAAAGCGTGGAGATAAAAAGATTAACCTAACCGCAAAAGAGTATGCCCTGCTTGAATACCTA
GCAAGAAATTCCAAGAAGCTCTTAAGTGAGACAATTATAAAAGAGAATCTAAGTGATATGGCAGAGGTCAGTATGAGTAA
TATCGTAAATGTTTATATCTACCGTTTGCGCAATAAAATAGATAAAGATTATGAGCCAAAACTTATACATACAGTAAGAG
GATTAGGCTACATGTTAAGCGAGAAAGATGTTTAA

Protein sequence : 
MRILVVEDDEKIASFIKKGLQEESYSVDVTSNGYEAIYLVETNSYDIVLLDLMIHGLGGIDVCKNIRGKNIATPIIMLTA
RDAIKDKVEGLDCGANDYLTKPFSFEELLARIRSKLRTTSTLSSTIAIADLTINTARREVKRGDKKINLTAKEYALLEYL
ARNSKKLLSETIIKENLSDMAEVSMSNIVNVYIYRLRNKIDKDYEPKLIHTVRGLGYMLSEKDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-35 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Suden_0317 YP_392833.1 two component transcriptional regulator BAC0125 Protein 4e-39 45
Suden_0317 YP_392833.1 two component transcriptional regulator BAC0197 Protein 1e-36 45
Suden_0317 YP_392833.1 two component transcriptional regulator BAC0308 Protein 3e-39 44
Suden_0317 YP_392833.1 two component transcriptional regulator BAC0638 Protein 6e-35 44
Suden_0317 YP_392833.1 two component transcriptional regulator BAC0083 Protein 6e-40 42
Suden_0317 YP_392833.1 two component transcriptional regulator BAC0111 Protein 5e-41 42
Suden_0317 YP_392833.1 two component transcriptional regulator HE999704.1.gene1528. Protein 6e-31 41
Suden_0317 YP_392833.1 two component transcriptional regulator BAC0347 Protein 5e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Suden_0317 YP_392833.1 two component transcriptional regulator VFG1390 Protein 1e-39 43
Suden_0317 YP_392833.1 two component transcriptional regulator VFG0596 Protein 5e-36 41