Gene Information

Name : Suden_0313 (Suden_0313)
Accession : YP_392829.1
Strain : Sulfurimonas denitrificans ATCC 33889
Genome accession: NC_007575
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 317024 - 318277 bp
Length : 1254 bp
Strand : -
Note : -

DNA sequence :
ATGTTGCTTCCTTTTTTAATATTTCTTGTAACTCTTATTTTAATTATATGGCAGCCACGTGGATTACAAATAGGAACTAT
TGCTATATCTGGCGCAATAGTTGCTCTTATTTTTGGTGTTGTAAACTTTAATGATGTTTTGAGTGTTTTTGATATTATCT
GGGACGCAACGCTCGCTTTTATAGGCATAATAATCTTCTCTATGATTTTAGATGAGATAGGCTTTTTTGAGTACTGCGCT
CTTGTGATGGCAAAACTATCCAATGGAAGTGGAAGAGCAATGTTCTTTTACTCTATAATTTTAGGTGCTCTTGTTTCAGC
ACTTTTTGCAAATGATGGAGCAGCACTTATCTTAACTCCTATCTTACTTGCAAAAATGAAAATTCTTAGATTAAACACAA
AAACTATTCTTGCATTTTTACTTGCTGGTGGTTTTATAAGTGATAGTGCATCTTTGCCTTTTGTATTTTCAAATTTAACA
AATATAGTTACCGCCAACTACTTCAACATAGGCTTTGGAACTTTTTTTGCAAATATGATTTTCCCATTTTTCATAAGCAC
ACTGATAAGTATGCTCATACTTTGGATAGTTTTGCGCAAAGACATTCCTTTACATGTAGATATAACTTTACTTAAAAACC
CAAAAGATGCCATAAAGCACAAAGGACTATTTAACTTCTCTTGGCTCTTTATAGCACTTCTGCTTTGTAGCTATTTTATA
GGAGATACTTATCATCTGCCTATCTCTTTGTTTGCTCTAGGCGGTGCACTTATATTTCTACTCATTGCTACATTTGCCAA
AGCAGTTAAACCAAAAGAGATAATTAAAGATGCACCTTGGCAAGTTGTATGGTTTTCACTTGGTCTTTATATAGTTGTTT
ATGGGCTTAAAAATGCAGGCTTGACTAATTACTTGAGTGAGATTTTGCTCTACTTAAATACTCAAAGCCAGCTTATAGCA
GTTGTTGGAACTGGCTTTTTAGCTGCAATTTTATCTGCTGTGATGAACAATATGCCTACTATCATGATTATGGATATAGC
ACTCAAAGATATTGCAAACGAAGCGATGATATATGCAAATATCATAGGTTGTAATCTAGGTCCAAAGATGACGCCATTTG
GCTCACTTGCTACACTTTTATGGCTTCATACGCTAGAGAAAAAAGGGATAAAAATTAATTACTACTCATATACAAAATTT
GGTCTTTTAGTAACCCCCATAGTTTTGTTAGCTGTCCTACTCTCACTGCTTTAA

Protein sequence :
MLLPFLIFLVTLILIIWQPRGLQIGTIAISGAIVALIFGVVNFNDVLSVFDIIWDATLAFIGIIIFSMILDEIGFFEYCA
LVMAKLSNGSGRAMFFYSIILGALVSALFANDGAALILTPILLAKMKILRLNTKTILAFLLAGGFISDSASLPFVFSNLT
NIVTANYFNIGFGTFFANMIFPFFISTLISMLILWIVLRKDIPLHVDITLLKNPKDAIKHKGLFNFSWLFIALLLCSYFI
GDTYHLPISLFALGGALIFLLIATFAKAVKPKEIIKDAPWQVVWFSLGLYIVVYGLKNAGLTNYLSEILLYLNTQSQLIA
VVGTGFLAAILSAVMNNMPTIMIMDIALKDIANEAMIYANIIGCNLGPKMTPFGSLATLLWLHTLEKKGIKINYYSYTKF
GLLVTPIVLLAVLLSLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 9e-87 51
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-90 51
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-86 50
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 6e-78 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Suden_0313 YP_392829.1 arsenical pump membrane protein BAC0574 Protein 3e-88 51
Suden_0313 YP_392829.1 arsenical pump membrane protein BAC0575 Protein 6e-89 51
Suden_0313 YP_392829.1 arsenical pump membrane protein BAC0578 Protein 2e-79 49
Suden_0313 YP_392829.1 arsenical pump membrane protein BAC0576 Protein 7e-79 49
Suden_0313 YP_392829.1 arsenical pump membrane protein BAC0031 Protein 7e-76 48
Suden_0313 YP_392829.1 arsenical pump membrane protein BAC0577 Protein 4e-78 48