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Name : Suden_1667 (Suden_1667) Accession : YP_394179.1 Strain : Sulfurimonas denitrificans ATCC 33889 Genome accession: NC_007575 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1749101 - 1750348 bp Length : 1248 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATTGATTTAAAACTATTACAAAAAGATTTCCAAACTATAAGCAACAAACTCTCTCGCAAAGGTGTTGATGCTGATTT ACTTGAAAATTTAAAGATAAGAAATGAAGAACTAAAAGTTGCAAAAGTTGCGTATGAAACTCTTCAAGCAGCTCAAAACA GCATGAGTAAAGATTTTGGCATATACAAAAAAGAGGGTAGAGATACAACTGAGCTAAAAGCTAAAGTAGATGAAAATAAA ATTAAAATTGCTGAGGCTCTTGATACTCAACGAATCAAGCAAGAAGCTCTAGAATACCTTGCCATGTCAATTCCAAATAT CCCAGATGATGATGTTCCTGATGGCAAAGATGAGAATGACAATGTTGAGATAAAAAAGGTTCTAACTCCTAAAGAGTTTA GCTTTACACCAAAAGAGCATTGGGAATTAGCTGGACAAAATGGCTGGATAGATTTTGAGCGAGGTGTAAAACTGGCAACT AGCCGCTTTAGTGTATCTTTTGGAATGGGTGCAAAACTAGAGCGCGCACTTATAAACTTTATGCTTAACTTTAACTCAAA GAGAGGATTTGAGGAGGTTAGCGTTCCTTCTCTTGTAAATAGAGCGGCGTTAGAGGGAACTGGACAACTTCCAAAATTTG AAGATGATTTATATAAAATACAAGGTCAAGAGTTATTTTTAATTCCAACTGCTGAAGTACCTGTTACAAATCTTTATCAA GATGAAATACTACATGTTGAGAGGCTTCCTATAAAAATGACTGCTTATACCTCATGCTTTAGAAAAGAAGCAGGCGCAGC GGGAAGAGATACAAGAGGTATGATAAGACAGCATCAGTTTCATAAAGTTGAACTTGTAAGCATTACAAAGCCTCAGCAGA GTGATGAAATTTTTGATGAGATGGTGCAAACCGCTTCAGATTTACTATCTGCGCTCGAACTTCCACATCGCCTTGTAAGA CTTTGTGGCGGAGATTTAGGGTTTGGTGCTGCAAAAACAGTGGATCTTGAAGTTTGGCTTCCAGGACAAAATGCTTACCG TGAAATCTCTTCTGTAAGCAACACAAGAGAGTTCCAAGCAAGAAGAGCAAAAATTCGCTTTAAAGACGGCGATAAAAACT CATTTGTTCATACATTAAATGGCTCATCTTTAGCAGTTGGAAGAACTCTTGTCGCTATCATGGAGAACTTCCAAAATGAG GATGGAAGTATTACTATTCCAAAGGTACTATCTCCCTATTTAAACTAG Protein sequence : MIDLKLLQKDFQTISNKLSRKGVDADLLENLKIRNEELKVAKVAYETLQAAQNSMSKDFGIYKKEGRDTTELKAKVDENK IKIAEALDTQRIKQEALEYLAMSIPNIPDDDVPDGKDENDNVEIKKVLTPKEFSFTPKEHWELAGQNGWIDFERGVKLAT SRFSVSFGMGAKLERALINFMLNFNSKRGFEEVSVPSLVNRAALEGTGQLPKFEDDLYKIQGQELFLIPTAEVPVTNLYQ DEILHVERLPIKMTAYTSCFRKEAGAAGRDTRGMIRQHQFHKVELVSITKPQQSDEIFDEMVQTASDLLSALELPHRLVR LCGGDLGFGAAKTVDLEVWLPGQNAYREISSVSNTREFQARRAKIRFKDGDKNSFVHTLNGSSLAVGRTLVAIMENFQNE DGSITIPKVLSPYLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-89 | 49 |
