Gene Information

Name : Tcr_0550 (Tcr_0550)
Accession : YP_390820.1
Strain : Thiomicrospira crunogena XCL-2
Genome accession: NC_007520
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 614488 - 615162 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence : 
TTGCAAAATGAGCCTGTATTGGCATTGGAAAAGGTGCATTATCATGTCTCATCTGATGAAGAAGTGTTGTCTATCATAAA
GGGCTGTGATTTATCTGTCCAGCTAGGTGAAAAGCTCGCCATTGTCGGTCGTTCTGGTTCGGGAAAATCGACGTTATTGG
CACTTATGGCCGGGCTGGAGCTTCCTTCCGCGGGTGAAATTCGGCTACTTGGACAAGCACTCAGTCAATTAAATGAAGAT
GAACGCGCCAAAGTACGAGCGATGGCGGTTGGGTTTGTGTTTCAGAATTTTCAATTGATGCCGAGCATGACCGCATTAGA
AAATGTATTGATGCCATTGGAGCTCTTTCAAATGCCCGATGCAGAACGAGAAGCCAGGCATGCACTGGAACGGGTTGGGC
TGTCAAATCGTTTGACCCATCGTCCGTCAGAGTTGTCAGGAGGCGAGCAACAACGTGTGGCGATTGCACGGGCATTCGTG
ACACGCCCAAAAATTTTGTTTGCCGATGAACCGACAGGCAACCTTGATGAAACCACTGCGGAACAAATACAAAATCTTTT
GTTTCGACTGAATGATGAATTAAAAACCACATTGATTCTGGTGACGCATGATAATCGTTTGGCACAGCAATGCGATCGTG
CCTTATCGTTGCAAAATAGGCAGTTGCACGGATGA

Protein sequence : 
MQNEPVLALEKVHYHVSSDEEVLSIIKGCDLSVQLGEKLAIVGRSGSGKSTLLALMAGLELPSAGEIRLLGQALSQLNED
ERAKVRAMAVGFVFQNFQLMPSMTALENVLMPLELFQMPDAEREARHALERVGLSNRLTHRPSELSGGEQQRVAIARAFV
TRPKILFADEPTGNLDETTAEQIQNLLFRLNDELKTTLILVTHDNRLAQQCDRALSLQNRQLHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-26 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tcr_0550 YP_390820.1 ABC transporter NC_008702.1.4606598. Protein 1e-33 47
Tcr_0550 YP_390820.1 ABC transporter NC_012469.1.7686878. Protein 2e-33 46