Gene Information

Name : Tcr_0541 (Tcr_0541)
Accession : YP_390811.1
Strain : Thiomicrospira crunogena XCL-2
Genome accession: NC_007520
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 606569 - 607261 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTGAGCAATGCATTTTAGTTGTGGAAGATGAAGCTGCAATTCGTGATATGTTAAGTTTTACGTTAACCGCAGCAAA
TTACAAAGTCATTGAGGCACCAAATGCGGAGCAAGGCTGGAAGTTATTGCTGGAGCATCAACCGGATTGCGTATTATTGG
ATTGGATGCTGCCTGGTGTATCAGGGATTTCTTTAGCACAGCGTATTCGTCAAAACGATCAAACGGCCACAACTCCCATC
ATCATGTTGACAGCGCGAGGGGAGGAGAATGATCAAGTGCAAGGCTTTGAATCTGGTGCAGATGATTATGTAGTCAAACC
TTTTTCTCCGCGAGCATTGGTCGCTCGAGTAAAAGCGTTATTAAGACGCCAATCGCCTGAAAAAAGTACCTTAGACTTGA
TTAAAATCGGTCCGCTGAAGTTGGATCTGTCCAGCTATCGTTTTACAGTCAATGATGAAGAAGTTAAACTGGGCCCAACA
GAATTCAAATTAATGCAGTTCTTTATGACCCACTCAAATCGTGTCTACACACGCGTCCAATTGCTGGATCAGGTTTGGGG
TGAAAATGTCGTTGTAGAGGAAAGAACGGTTGATGTTCATATCCGACGTTTAAGAAAATTATTAGATCCGGTCGGAGCCG
CCGATTATATTCAAACCGTCAGGGGAGCTGGCTACCGTTTCTCCGTTGATTAA

Protein sequence : 
MAEQCILVVEDEAAIRDMLSFTLTAANYKVIEAPNAEQGWKLLLEHQPDCVLLDWMLPGVSGISLAQRIRQNDQTATTPI
IMLTARGEENDQVQGFESGADDYVVKPFSPRALVARVKALLRRQSPEKSTLDLIKIGPLKLDLSSYRFTVNDEEVKLGPT
EFKLMQFFMTHSNRVYTRVQLLDQVWGENVVVEERTVDVHIRRLRKLLDPVGAADYIQTVRGAGYRFSVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tcr_0541 YP_390811.1 two component transcriptional regulator NC_012469.1.7685629. Protein 6e-36 43
Tcr_0541 YP_390811.1 two component transcriptional regulator NC_002952.2859858.p0 Protein 6e-35 42
Tcr_0541 YP_390811.1 two component transcriptional regulator NC_007622.3794948.p0 Protein 6e-35 42
Tcr_0541 YP_390811.1 two component transcriptional regulator NC_003923.1003417.p0 Protein 6e-35 42
Tcr_0541 YP_390811.1 two component transcriptional regulator NC_013450.8614146.p0 Protein 6e-35 42
Tcr_0541 YP_390811.1 two component transcriptional regulator NC_002951.3238224.p0 Protein 6e-35 42
Tcr_0541 YP_390811.1 two component transcriptional regulator NC_007793.3914065.p0 Protein 6e-35 42
Tcr_0541 YP_390811.1 two component transcriptional regulator NC_002758.1121390.p0 Protein 6e-35 42
Tcr_0541 YP_390811.1 two component transcriptional regulator NC_010079.5776364.p0 Protein 6e-35 42
Tcr_0541 YP_390811.1 two component transcriptional regulator HE999704.1.gene2815. Protein 2e-40 42
Tcr_0541 YP_390811.1 two component transcriptional regulator AE015929.1.gene1106. Protein 1e-28 41
Tcr_0541 YP_390811.1 two component transcriptional regulator BAC0197 Protein 9e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tcr_0541 YP_390811.1 two component transcriptional regulator VFG1702 Protein 9e-33 41