|
Name : Tcr_0503 (Tcr_0503) Accession : YP_390773.1 Strain : Thiomicrospira crunogena XCL-2 Genome accession: NC_007520 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 563468 - 564403 bp Length : 936 bp Strand : - Note : - DNA sequence : ATGGATACTTTAACGATTGCCAAACGCGTTTTCGACATTGAAGCAGAAGCCGTTTACCACCTCAAAACATTGCTTGATGA AAATTTTTCTCAAAGTGTTGATGCCATTTTAGCCACCGAAGGTCGCGTCGTTATTTGTGGGATGGGAAAATCCGGTCTCA TTGGCAAAAAAATTATGGCCACACTGGCCAGCACAGGCACACCTTGTTTTTTTATGCACCCTGGCGAAGCATTCCATGGT GATTTGGGGATGGTTTCACCCAAAGATGTCTTTATTGCGCTCTCTAATTCAGGGGAAACGGAAGAAGTCATCAAACTAAT CCCTTTTTTAAAGGACAATGGCAACACGATTATTTCCATGACTGGTCGACCTGACTCCACCTTAGCAAAAAATTCAAATT TCCATTTGAATATCGCCGTGCCACAAGAAGCTTGCCCGCACCAACTGGCTCCTACCTCCTCCACTACAGCCACGCTTGTC ATGGGCGATGCTCTGGCAGTGGCGTTAATGGAAAAGCGTGATTTTCAACCACAGGATTTTGCTCGTTTCCATCCCGGCGG CAGCTTAGGCCGTAAGCTTCTAACGCGTGTAAAACATGAAATGAAATCGGAAAACCTGCCTTTTGTTGAAAAATCCGCCT CCATGAAAGACGTCATTCACACCATGACGGATGGCCGTCTGGGGCTGTGCATTGTCAACCAAGGAGAAGGCATCATTACC GATGGCGACTTACGTCGTCAGATGGAAGAAGATCCTGCAAACTTTATGCAAAAAACCGCTGGTGACATCATGGGAACACA CCCTAAAATGATCGATTCAGAAGCACGGCTATCCGATGCGGAAGAAATGATGACGCAGAAAAAAATCACCTCTTTACTTG TGTCTGATCAGAACCAGGTTGTGGGCGTCATTCAAATTTACGATTTAAATAATTAA Protein sequence : MDTLTIAKRVFDIEAEAVYHLKTLLDENFSQSVDAILATEGRVVICGMGKSGLIGKKIMATLASTGTPCFFMHPGEAFHG DLGMVSPKDVFIALSNSGETEEVIKLIPFLKDNGNTIISMTGRPDSTLAKNSNFHLNIAVPQEACPHQLAPTSSTTATLV MGDALAVALMEKRDFQPQDFARFHPGGSLGRKLLTRVKHEMKSENLPFVEKSASMKDVIHTMTDGRLGLCIVNQGEGIIT DGDLRRQMEEDPANFMQKTAGDIMGTHPKMIDSEARLSDAEEMMTQKKITSLLVSDQNQVVGVIQIYDLNN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-63 | 46 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-63 | 46 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 8e-63 | 46 |
