Gene Information

Name : Tcr_0253 (Tcr_0253)
Accession : YP_390523.1
Strain : Thiomicrospira crunogena XCL-2
Genome accession: NC_007520
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 304981 - 305433 bp
Length : 453 bp
Strand : +
Note : -

DNA sequence : 
ATGAGAACTGAAAAATTGAATCAACGAAACCAGAATGTGGCTAAACAACAAGGATTTACCTTGATTGAATTAATGGTGGT
CGTGGTGATTTTAGCGATCCTGGCGGCCATTGCGGTGCCGCAATTTATGGATCGACCGGATGAAGCTCGAATTGTAAAAG
CAAAACAAGATATTTCTTCTTTGAGCTCGGCGTTACAACTTTATAAATTGGATAATTACCGTTACCCAACAACCGAGCAA
GGATTGGAAGCTCTGGTAAAGAAACCTACGGCGGAACCGGACGCTCCGAATTGGAAGCCGTACATGCAACAATTACCAAA
AGATCCGTGGGGTCAAGATTATTTATACCTCAGCCCGGGTGAAAAAGGTGATTTCGACCTTTACACATTAGGTGCCGATG
GTGAAGAAGGTGGTGAAGGCGTGAATGCGACGATAGGGAACTGGATGAGATAA

Protein sequence : 
MRTEKLNQRNQNVAKQQGFTLIELMVVVVILAILAAIAVPQFMDRPDEARIVKAKQDISSLSSALQLYKLDNYRYPTTEQ
GLEALVKKPTAEPDAPNWKPYMQQLPKDPWGQDYLYLSPGEKGDFDLYTLGADGEEGGEGVNATIGNWMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 8e-26 59
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 7e-26 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tcr_0253 YP_390523.1 general secretion pathway protein G VFG1871 Protein 3e-32 64
Tcr_0253 YP_390523.1 general secretion pathway protein G VFG0180 Protein 4e-31 63
Tcr_0253 YP_390523.1 general secretion pathway protein G VFG2050 Protein 3e-26 58