|
Name : Tcr_2148 (Tcr_2148) Accession : YP_392410.1 Strain : Thiomicrospira crunogena XCL-2 Genome accession: NC_007520 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1121 EC number : - Position : 2371358 - 2372149 bp Length : 792 bp Strand : - Note : - DNA sequence : ATGAAAACAATTCAAAACTCACCGCTGATTGTAAACCAGCTGAGCATGCGGTATCACCATAAGCCGGTTCTGACTGATGT CAGTTTTCAGATTCCGGAAGGAAAAACGATCGCAGTGGTAGGGCCGAATGGGGCTGGAAAGTCTACCTTGTTAAAAGGGA TTATGGGACTTGAGCCGACAATGAGCGGTGAGGTTCAATTTTTTGGGCAGCCGCTCGATCAGAAGCGCTTAGCGGTTGCT TATGTGCCACAAAGAGAAGAATCTGATTGGGATTTTCCCATTAACGTGATGGACGTTGTGTTGATGGGGCGACATGGCCA GCTCAAATTTTGGCAACGACCGTCTGCACAAGATGTGCTGATTGCCGAGCAAGCGTTAGAACAAGTGAGTATGTTGGACT TTAAAGATCGTCAAATCAATCAACTTTCTGGTGGGCAGCAACAACGTGTTTTCTTAGCAAGAGCATTAGCGCAAAAAGCG AGTCTTTATTTAATGGATGAGCCATTTGCCGGCGTCGATGTGACGACGGAAAAGGCCATCATTGAATTGTTTCGAACATT AAAATCTGAAAATAAAACCATCGTGTGTGTGCACCATGATTTGAATACGGTGGGGGAATACTTTGATTGGGTCATACTGG TTAACGCACGCCTGATTGCAGCGGGCCCAGCCGATGAGGTGTTAACACCGGAGAATTTGAATAAAACCTACGGCGGACGG TTATCGTTACTTAATGAAATGACGGAAAAGCTCTACCGTTCGAATATTGATCGAGTGCACGATGATGGATGA Protein sequence : MKTIQNSPLIVNQLSMRYHHKPVLTDVSFQIPEGKTIAVVGPNGAGKSTLLKGIMGLEPTMSGEVQFFGQPLDQKRLAVA YVPQREESDWDFPINVMDVVLMGRHGQLKFWQRPSAQDVLIAEQALEQVSMLDFKDRQINQLSGGQQQRVFLARALAQKA SLYLMDEPFAGVDVTTEKAIIELFRTLKSENKTIVCVHHDLNTVGEYFDWVILVNARLIAAGPADEVLTPENLNKTYGGR LSLLNEMTEKLYRSNIDRVHDDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0093 | AAM75296.1 | EF0093 | Not tested | Not named | Protein | 1e-42 | 43 |
| EF0575 | NP_814340.1 | cationic ABC transporter ATP-binding protein | Not tested | Not named | Protein | 2e-42 | 43 |
| sitB | NP_457256.1 | Iron transport protein, ATP-binding component | Virulence | SPI-1 | Protein | 1e-49 | 43 |
| sitB | NP_806465.1 | iron ABC transporter ATP-binding protein | Virulence | SPI-1 | Protein | 1e-49 | 43 |
| sitB | AAD41066.1 | SitB | Virulence | centisome 63 pathogenicity island | Protein | 6e-50 | 42 |
| sitB | YP_217782.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 2e-49 | 42 |
| sitB | NP_461783.1 | ATP-binding protein | Virulence | SPI-1 | Protein | 8e-50 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tcr_2148 | YP_392410.1 | ABC transporter | BAC0400 | Protein | 2e-61 | 56 |
| Tcr_2148 | YP_392410.1 | ABC transporter | BAC0440 | Protein | 3e-50 | 47 |
| Tcr_2148 | YP_392410.1 | ABC transporter | BAC0350 | Protein | 4e-50 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tcr_2148 | YP_392410.1 | ABC transporter | VFG0526 | Protein | 3e-50 | 42 |
