Gene Information

Name : Tcr_1646 (Tcr_1646)
Accession : YP_391912.1
Strain : Thiomicrospira crunogena XCL-2
Genome accession: NC_007520
Putative virulence/resistance : Unknown
Product : TniB protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1474
EC number : -
Position : 1798926 - 1799828 bp
Length : 903 bp
Strand : -
Note : -

DNA sequence :
ATGAGTTTTGAACATCTAACCCCTAAAACACAAGAATTGCTTGAGTTGAATAACGATGAACGGATTAAGGTTATTCGCTC
ATCTCGTTGGGTTGGGTATCCTAGAGCCAAGCAAGTTTTACATAAACTTGAAGAGCTGTTTAATTACCCGAAAAATGACC
GAATGCCGAACCTGTTGATTATTGGGGATACCAATAATGGTAAGACTGCTTTGGTTAAACGTTTTTGTAATATGCACCCT
GCTGAAGATACCCCTGAAGGTGATGCGATTATTTTTCCTGTTTTGTATATTGAATGTCCCCCTAAACCGGATGAAGGTCG
CTTGTATGATGAAATTCTCGGCAAGCTTTATCAGAAATTTAAAGAACGTGATAATGCTGGTAAGAAGCTTTCACAAGTGT
TAAAGGTGTGTGAAAAAATTGGCGTTAGGATGATTATCCTTGACGAGGTGCAACATATTCTTGCCGGAAGTGGTCATCAA
CAGCGTTTGTTTTTAAATGTTATTAAAACGCTAGGTAACAAATTGAAAGTTCCGATTGTCGCAGTTGGTATCAGGGAGGC
CTACAATGCTATTCAGGCTGATGCACAATTAGCTAACAGGTTTGAATTAGCACCTCTGCCAAGATGGAGATTAGGTGATG
AAGATTATGAAAGGTTGTTGGCCAGCTTTGAGGCATTATTGCCGTTAAGAGAGTCTTCCTCTCTCTACGAAAATCAGGTT
GCTAATAAGCTATTTTCAATGACTGAAGGTTATATTGGGGAGCTATCACGATTACTGTCCAAGGCCGCGGAAGGTGCTAT
TCAAAATGGAGAAGAGCGAATTACATTAAATCTATTGAATAGTTTGGATTGGGTTGCACCATCGGATCGAAAGCGTCAGA
TGGATAAGATACTGGGAATTTGA

Protein sequence :
MSFEHLTPKTQELLELNNDERIKVIRSSRWVGYPRAKQVLHKLEELFNYPKNDRMPNLLIIGDTNNGKTALVKRFCNMHP
AEDTPEGDAIIFPVLYIECPPKPDEGRLYDEILGKLYQKFKERDNAGKKLSQVLKVCEKIGVRMIILDEVQHILAGSGHQ
QRLFLNVIKTLGNKLKVPIVAVGIREAYNAIQADAQLANRFELAPLPRWRLGDEDYERLLASFEALLPLRESSSLYENQV
ANKLFSMTEGYIGELSRLLSKAAEGAIQNGEERITLNLLNSLDWVAPSDRKRQMDKILGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tniBdelta1 YP_006098382.1 transposition protein Not tested Tn2411 Protein 9e-51 43
tniB delta AFG30115.1 TniB delta Not tested PAGI-2 Protein 6e-51 43
tniB ACY75526.1 TniB Not tested Tn6060 Protein 6e-51 43
tniB ACY75529.1 TniB Not tested Tn6060 Protein 6e-51 43
tniB delta AET25392.1 TniB delta Not tested PAGI-2(C) Protein 6e-51 43