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Name : Tcr_1594 (Tcr_1594) Accession : YP_391860.1 Strain : Thiomicrospira crunogena XCL-2 Genome accession: NC_007520 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1744784 - 1747399 bp Length : 2616 bp Strand : + Note : - DNA sequence : ATGGCTGACACAATCAAGCACACCCCCATGATGCAGCAATACCTTGCTGTTAAAGCAGACTATCCAAATCAATTATTGTT TTATCGAATGGGGGATTTCTACGAGCTCTTTTATGAAGATGCGGTCAAAGCGTCTGAATTATTGGAAATTACGTTGACGG CTCGCGGGAAATCTGGCGGCAATCCTATTCCGATGGCGGGTATTCCGCATCATTCGGCCGAAGGGTATTTGGCAAAGTTG GTAAAACTGGGACAATCGGTCGCGATTTGTGAACAAATTGGTGATCCGTCAATATCAAAAGGCCCTGTAGAACGTAAAGT GGTGCGCGTCATCACACCGGGAACCTTGGTAGAGGATGCTTTATTAGAAGACAAGTCTGAAAATTTACTTGCCGCCATTT TCCAGCAAGCAGACGAATACGGACTGGCCACTCTGGATGTGGCCAGTGGCCGCTTTGAAGCCACATTGCTGCCAGACTCG ACACAATTAAGTGCCGAGGTAGAACGACTCAAGCCAGCTGAAATCATCTTGCCGGACGATCCACTCTTTAAACAGAACCT GCCTGAAAGCATCCAAAATCGACCAGGCCTGGTCGATTACCCAAGCTGGCACTTTGAAAAAGACAGCTGTCGAAAACGCT TGATAGACCATTTTGGCACACAAGATTTAGTGGCCTTCGGTTGTGACCAACTCCCGGCCGTCATCAGCGCGGCCGGCGTG ATTCTGCATTACGCACAATCCATGCTTCAAAATACGCTGGCTCATGTATTCAGCCTGCAAACCTATCAAGCCGATGATGC GCTGGCATTGGATGCCATGAGTCGACGTAATCTGGAACTCGACACTAACCTGACAGGCGGTAAAAATCACACCTTGTTTG CCATTTTAGACAATGCCACAACGGCGATGGGTAGCCGCTTGATGAACCGCTGGCTCAACCAGCCCTTGCGAAACCGAGAC ATTATCAATGATCGCTTCAATGCGATTGAAGACATCATTGAACAACACAGCCAAGAAGAATTTCGCAGCGCGTTAAAACC CATTGGCGACTTGGAACGCATTTTAAGCCGCGTGTCTTTATATTCTGCACGGCCTCGCGACATCTTACATTTAGGGCGGT CGCTAAACCAGCTCCCGGAACTTCAAGCCTTATTGAAGCAACAAACGGCCAATAAATGGCAACAGTTGTCCAAACAACTT GGTCTTTATCCGGAACTGGCAAGTCAACTAGAAACCGCGTTGGTTGAATCGCCCCCCATGTTGATGCGAGATGGCGGCGT TTTTGCCGAAGGTTATGACAGCGAACTGGATGAACTCCGTAACCTTAAAAACCAAGCCGGCGATTATTTATTGGCGCTGG AAGCACGTGAAAAAGAACGCACAGGCATCACCACCTTAAAGGTGGGCTATAACCGAGTGCATGGCTATTACATTGAAGTC AGTAAACTGCAATCGGATAATGTGCCGGCAGATTATGTCCGCCGCCAAACTTTAAAAGCACAAGAACGTTATATCACCCC CGAATTGAAAGAATTTGAAGACAAAGTTCTCAGTGCGAATGAAAAAGCACTGGCTCGCGAAAAGTGGTTATATCAACAAT TATTGGAACGCTTAAACCAAGATTTGCAAGCGCTACAACGAACCGCAGCGGCACTGGCCGAAACGGATGTTTTGGTGTCT TTAGCCCGTCAGGCCATCAACCTAAATTTAACACGACCGACCTTAAGTTCGGAACCTGGCATTGACATCAAACAGGGGCG TCACTTAACCGTGGAAGCGCTATCGAACCAACCGTTTATTCCGAACGATACCTGTTTTGATGAACAGCGCCGATTACAAA TTATCACCGGGCCCAACATGGGCGGTAAATCAACCTTCATGCGCCAAACCGCTTTGATTGCGATTATGGCGTACATGGGA AGCTTTGTGCCTGCTGAATCGGCCACTCTAGGACCGATTGATCGTATTTTCACTCGCATCGGGGCTTCGGACGATCTGAC CTCCGGTCGCTCCACTTTTATGGTGGAAATGACGGAAACAGCCAACATTCTTCATCATGCCTCACCGGAATCTTTAATTC TGATGGACGAAGTCGGACGAGGTACCTCAACCTTTGACGGACTGGCACTTGCCTGGGCCATTGCCGAACAAATGGCGCAA AGCATCCAAGGCTATTGCCTGTTTGCCACCCACTACTTTGAGCTCACCACACTGGTAGAGCAGTTCAATAATACGGTCAA CATTCATCTCAGCGCCATAGAACACCAGGATAAAATTGTCTTCATGCATCAGGTCGAAGAAGGTCCAGCCTCTCAAAGTT ACGGACTACAAGTAGCGGCTTTAGCCGGTGTACCAACTGCCGTCATAGACAAGGCCAAAAAACACCTACACCGTTTGGAA AATCAAACCGCAGCACAACAGCAAACCTCTGGCACAGCCTCTTCAGCAAAAGAATCTGTGCAACAATTTGATTTATTCGC TCAACCCGCTTTACCGGAAGCCATAGAAACCATGCTGACCGACCTGAAAGCCTTATCGGTTGATGATTTAACACCGAGAC AAGCACTTGAAAAATTGTACGAAGTCACTAATACAGTTAAAAATGCATCCGAATAA Protein sequence : MADTIKHTPMMQQYLAVKADYPNQLLFYRMGDFYELFYEDAVKASELLEITLTARGKSGGNPIPMAGIPHHSAEGYLAKL VKLGQSVAICEQIGDPSISKGPVERKVVRVITPGTLVEDALLEDKSENLLAAIFQQADEYGLATLDVASGRFEATLLPDS TQLSAEVERLKPAEIILPDDPLFKQNLPESIQNRPGLVDYPSWHFEKDSCRKRLIDHFGTQDLVAFGCDQLPAVISAAGV ILHYAQSMLQNTLAHVFSLQTYQADDALALDAMSRRNLELDTNLTGGKNHTLFAILDNATTAMGSRLMNRWLNQPLRNRD IINDRFNAIEDIIEQHSQEEFRSALKPIGDLERILSRVSLYSARPRDILHLGRSLNQLPELQALLKQQTANKWQQLSKQL GLYPELASQLETALVESPPMLMRDGGVFAEGYDSELDELRNLKNQAGDYLLALEAREKERTGITTLKVGYNRVHGYYIEV SKLQSDNVPADYVRRQTLKAQERYITPELKEFEDKVLSANEKALAREKWLYQQLLERLNQDLQALQRTAAALAETDVLVS LARQAINLNLTRPTLSSEPGIDIKQGRHLTVEALSNQPFIPNDTCFDEQRRLQIITGPNMGGKSTFMRQTALIAIMAYMG SFVPAESATLGPIDRIFTRIGASDDLTSGRSTFMVEMTETANILHHASPESLILMDEVGRGTSTFDGLALAWAIAEQMAQ SIQGYCLFATHYFELTTLVEQFNNTVNIHLSAIEHQDKIVFMHQVEEGPASQSYGLQVAALAGVPTAVIDKAKKHLHRLE NQTAAQQQTSGTASSAKESVQQFDLFAQPALPEAIETMLTDLKALSVDDLTPRQALEKLYEVTNTVKNASE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tcr_1594 | YP_391860.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 54 |
