Gene Information

Name : Tcr_1510 (Tcr_1510)
Accession : YP_391776.1
Strain : Thiomicrospira crunogena XCL-2
Genome accession: NC_007520
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 1645356 - 1646528 bp
Length : 1173 bp
Strand : -
Note : -

DNA sequence : 
GTGAAAATTTCAATTGTTGGTAGTGGGTATGTTGGCTTGTCCTTGGCAGTGCTGTTAGCACAAAAAAATGAAGTTGTGGC
GCTTGATATCGTAGAAGAAAAAGTCACGTTGTTAAACGATAAACAGTCACCAATTGTGGATCCAGAAATTGAAGAGTTTC
TACAATATAAAGCTTTAAATTTAACGGCTACTTTGGATAAGCAAAAAGCGTATCAAGATGCCGAATTTGTCATTATTGCA
ACGCCGACGGACTATGATACTCAGACCAATACGTTTGATACCCGTTCAGTTGAAGCGGTTATACAAGATGTAATGACTGT
TAACCCTCGTGCTGTAATGGTAATCAAGTCAACCGTTCCAGTTGGGTATACAGAGCAGGTTAAGAAGCAATTTAACAGTG
AAAATATTCTTTTCTCACCTGAATTTTTAAGAGAAGGTAAAGCTTTGTATGACAACCTCTACCCTTCACGAATTATCGTC
GGGGAAAAGTCAGAGCGGGCAAAAATCTTTGCAGATCTTTTGATTGAAGGGGCCTCGAAACCTAGAGATGAGATTGATGT
GCTGTTTACCAAATCAACCGAAGCGGAAGCGGTTAAATTATTTTCAAATACGTACTTAGCCATGAGGGTTGCGTATTTTA
ATGAACTGGACACTTACTGTGAGACGCATAACTTAGATTCTCGTCAAGTAATTGAAGGTGTTGGGTTAGACCCTCGTATT
GGTAATCATTACAATAACCCGTCTTTTGGCTATGGTGGCTATTGTTTACCAAAAGATACCAAGCAATTGCTGGCGAATTA
TGATCAAGTGCCAAATAATTTAATTAAAGCGATTGTTGATGCAAATACTACTCGAAAGGATTTTGTTGCGGATTCTGTAA
TCAAAAGAAACCCAAAGGTAGTGGGTATTTACCGCTTAGTGATGAAGAGCGGGTCGGATAACTTTAGAGCCTCAGCAATT
CAAGGCGTTATGAAGCGTATAAAGGCTAAAGGAATTGAAGTGGTGGTTTATGAACCCGTGCTTGAAGAGGAAAGCTTTTT
TAACTCAAGGGTTATTAATAATTTAGAAGACTTTAAGAAAATATCGGATGTTGTCATTGCGAATCGGATGACGGACGATA
TTTTTGATATTGAGGATAAAGTCTACACACGTGATTTATTTGGACAGGATTAA

Protein sequence : 
MKISIVGSGYVGLSLAVLLAQKNEVVALDIVEEKVTLLNDKQSPIVDPEIEEFLQYKALNLTATLDKQKAYQDAEFVIIA
TPTDYDTQTNTFDTRSVEAVIQDVMTVNPRAVMVIKSTVPVGYTEQVKKQFNSENILFSPEFLREGKALYDNLYPSRIIV
GEKSERAKIFADLLIEGASKPRDEIDVLFTKSTEAEAVKLFSNTYLAMRVAYFNELDTYCETHNLDSRQVIEGVGLDPRI
GNHYNNPSFGYGGYCLPKDTKQLLANYDQVPNNLIKAIVDANTTRKDFVADSVIKRNPKVVGIYRLVMKSGSDNFRASAI
QGVMKRIKAKGIEVVVYEPVLEEESFFNSRVINNLEDFKKISDVVIANRMTDDIFDIEDKVYTRDLFGQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-84 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tcr_1510 YP_391776.1 UDP-glucose/GDP-mannose dehydrogenase VFG0963 Protein 3e-93 53