|
Name : Tcr_0148 (Tcr_0148) Accession : YP_390418.1 Strain : Thiomicrospira crunogena XCL-2 Genome accession: NC_007520 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 179361 - 181253 bp Length : 1893 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAGTACCTTTAAAAATGCACTCCCCGCATCGAACGACATCCTAACCCGTGACCCGTTACCGGCGTCCCATAAAACCTA TATTTCAGGCGAAATTCACCCGGAAATCAAGGTGCCTATGCGAGCCATTACCCTAACCAATGGTGAAACCGTAACCGTTT ACGACACCTCTGGCCCTTATACCGACCCGAACATAGAAATCGATGTGGCACAAGGGATTCCAACGGTTCGAAAAGACTGG ATTGCCAACCGTAACGATGTGGAAGCGTACGAAGGCCGCATTATCGACCCAAAAGACAATGGGTATAAAAACCGCACGCA AATGGAAACCGCCATTGCCGGCGCTTCAAGCTTGATGCGCCAACCATTGAGAGCAAAAGCCGGACAAAATGTGACTCAGC TGCACTATGCTCGTCAAGGCATTATTACGCCTGAAATGGAGTTTATCGCTATCCGCGAAAACCAACGACGCGACATGACC CGTCGTTATCTGAATGACCCAGAACGCGAAGCCCGCTTAAAAGGCGAAAACTTCGGTGCCAATTTACTAGAAGACATCAC TCCTGAATTTGTTCGAAAAGAAGTGGCTGAAGGTCGTGCCGTCATTCCAGCCAACATCAATCACCCAGAATCCGAACCGA TGATTATCGGACGAAACTTTCTGGTAAAAGTGAATGCCAACATCGGCAATTCCGCCACCACCTCTTCGATTGGCGAAGAA GTTGAAAAAATGGTTTGGGCCACTCGCTGGGGTGCCGATACTGTCATGGACTTATCTACAGGGCAAAACATTCACACCAC TCGTGACTGGATTTTACGAAATGCCCCCGTTCCAATTGGCACGGTACCGATTTATCAGGCACTGGAAAAGGTAAATGGCG TTGCGGAAGACCTGACCTGGGAAATCTTCCGAGACACTTTGATTGAGCAAGCGGAACAAGGGGTCGATTACTTCACCATC CATGCCGGCGTCCTTTTACGCTACGTGCCAATGACGGCGAAACGCGTCACCGGCATTGTCTCCCGAGGTGGGTCGATCAT GGCGAAATGGTGTATCGCCCACCACAAAGAAAACTTTTTATACACGCACTTTGAAGATATCTGCGAAATTTTAAAACAAT ATGATGTGTCTTTTTCTTTAGGCGATGGGCTTCGTCCTGGTTCCGTCGCGGATGCCAACGACGAAGCGCAGATTTCTGAA CTCAAAACATTGGGCGAGCTCACTCAGATTGCTTGGAAGCACGATGTACAAGTCATCATTGAGGGGCCGGGGCATGTGCC GATGCATATGATTAAAGAGAATATGGACAAGCAGTTGGAATATTGCCATGAAGCGCCTTTCTATACATTAGGCCCTTTAA CAACGGATATCGCACCTGGCTACGACCACATCACCTCAGGGATTGGAGCGGCGATGATCGGCTGGTTTGGAACCGCCATG CTGTGTTATGTAACGCCTAAAGAGCATCTTGGCTTGCCAAACCGGGATGACGTTAAAGAAGGACTGATCACCTATAAACT GGCCGCGCATGCGGCAGACATTGCCAAAGGCCATCCCGGCGCACGCTCAAGAGATGATGCGCTCAGCCAGGCACGTTTTG AATTCCGTTGGGAAGACCAGTTCAACCTAGGATTGGACCCTGAAAAGGCTCGCGCCTTCCATGATGAAACCTTACCAAGA GACTCGGCTAAAGTGGCCCACTTCTGTTCGATGTGTGGCCCCAAATTCTGTTCAATGAAAATTTCACAGGAAGTGCGCGA CTATGCGGATAAGCAAGGACTATCCACAGAAGATGCCGTCAACAAAGGGATGGAGGAAATGTCCCAAACCTTCAAAAACC AAGGCAGTGAAGTGTACGTTAACGTCGAAGACATCACAAAAACAGGTTCTTAA Protein sequence : MSTFKNALPASNDILTRDPLPASHKTYISGEIHPEIKVPMRAITLTNGETVTVYDTSGPYTDPNIEIDVAQGIPTVRKDW IANRNDVEAYEGRIIDPKDNGYKNRTQMETAIAGASSLMRQPLRAKAGQNVTQLHYARQGIITPEMEFIAIRENQRRDMT RRYLNDPEREARLKGENFGANLLEDITPEFVRKEVAEGRAVIPANINHPESEPMIIGRNFLVKVNANIGNSATTSSIGEE VEKMVWATRWGADTVMDLSTGQNIHTTRDWILRNAPVPIGTVPIYQALEKVNGVAEDLTWEIFRDTLIEQAEQGVDYFTI HAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCIAHHKENFLYTHFEDICEILKQYDVSFSLGDGLRPGSVADANDEAQISE LKTLGELTQIAWKHDVQVIIEGPGHVPMHMIKENMDKQLEYCHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAM LCYVTPKEHLGLPNRDDVKEGLITYKLAAHAADIAKGHPGARSRDDALSQARFEFRWEDQFNLGLDPEKARAFHDETLPR DSAKVAHFCSMCGPKFCSMKISQEVRDYADKQGLSTEDAVNKGMEEMSQTFKNQGSEVYVNVEDITKTGS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 70 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 70 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 66 |
