Gene Information

Name : Tcr_1400 (Tcr_1400)
Accession : YP_391669.1
Strain : Thiomicrospira crunogena XCL-2
Genome accession: NC_007520
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 1512685 - 1513860 bp
Length : 1176 bp
Strand : -
Note : -

DNA sequence :
ATGTCTTTGTCTTCAAATACGGCTTTTTCTGATTTTGATGTTCAAATGATGCAAAGAGCAATTGATTTGGCTCGAAAAGG
ACTTTATTCAACAAAGCCGAATCCTGCAGTTGGGTGTGTCATAACCCAACAAGAAAACATCATTGCTGAAGGGTGGCACC
AGAAAGCGGGTGAACCTCATGCGGAGCGTGTTGCATTAGCCAATGCGACGGAGTCGGTTAAGGGCGCAACGGTGTATGTT
ACTTTAGAGCCTTGCTCACATCATGGCAAAACGCCGCCTTGTGCGGATGCCTTAGTTGACTCTGGGGTGGCTAGAGTGGT
GATTGCCATGCAAGATCCTAATCCGCTTGTGGCCGGAAATGGAATTAAAAGATTAGAGCAGGCGGGGATTGTCGTTGACA
GTGGTATTTTGTCTGAAGAAGCTGCGGCTTTAAATAAAGGGTTTGTTTCTGTAATGACATCGAATAGACCTTTTGTTCGC
TTAAAAGTAGCGAACAGTTTAGATGGCCGAACCGCGATGGCGAATGGCGAAAGCCAATGGATCACCGGGCCGGAAGCACG
GCATCAAGTTCATTTGATGCGAGCTCAGCATGGGGCGATTGTCACAGGGGTTGGAACCGTTTTAGCGGATGATCCGAGTT
TAAATGTGCGTTTATCGGAATCGGTCTTGACCGAACTGGGCTTAACCTCGGAAAATTGTCATCCTTTAAGGGTTGTGTTG
GATGCAAATTTGAGCACACCTTTAGACGCCAAAATGCTGTCTTTGCCTGGGCGAACGCTTTTAATGACCTCGAAAGAAAC
GGTCGATCAAAATTTGGATTTGATTGAGCGGTTTTATCAAAAAGGTGCGGAAGTGATTGCCGTTGAATCGGATGGTGATA
AGTTGGACATTCCGTCCGTGCTTTCGTATTTGGTGGAAAGTGAAAACATCTATGATGTGATGGTTGAAGCGGGCGCCATC
GTTGCAGGGGCCTTTATTCAGGCCGATGTGGTTAATGAATTGCATGTTTTTACCGCGCCTATTTTAATGGGCGAGATGGC
CAAACCCATGTTTGTTTTGCCAGGCCTGACCGAAATGGCCGATAAAAAGGTTTTTGCTTACCAGTCTGTTCAAGCGCTAG
GGGAAGATTTATACTTGGTGCTGACACCCAAAATCAACCCCTCAGAGGATGTTTAA

Protein sequence :
MSLSSNTAFSDFDVQMMQRAIDLARKGLYSTKPNPAVGCVITQQENIIAEGWHQKAGEPHAERVALANATESVKGATVYV
TLEPCSHHGKTPPCADALVDSGVARVVIAMQDPNPLVAGNGIKRLEQAGIVVDSGILSEEAAALNKGFVSVMTSNRPFVR
LKVANSLDGRTAMANGESQWITGPEARHQVHLMRAQHGAIVTGVGTVLADDPSLNVRLSESVLTELGLTSENCHPLRVVL
DANLSTPLDAKMLSLPGRTLLMTSKETVDQNLDLIERFYQKGAEVIAVESDGDKLDIPSVLSYLVESENIYDVMVEAGAI
VAGAFIQADVVNELHVFTAPILMGEMAKPMFVLPGLTEMADKKVFAYQSVQALGEDLYLVLTPKINPSEDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-66 47
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-66 47