Gene Information

Name : Tcr_1399 (Tcr_1399)
Accession : YP_391668.1
Strain : Thiomicrospira crunogena XCL-2
Genome accession: NC_007520
Putative virulence/resistance : Unknown
Product : riboflavin synthase subunit alpha
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0307
EC number : 2.5.1.9
Position : 1512020 - 1512685 bp
Length : 666 bp
Strand : -
Note : catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine

DNA sequence :
ATGTTTACCGGTATTATTGAAACGGAAGGTTTTGTTTCACGTATTGAACCCGTTAATGGCGATGCGCGTATGACCATTGA
GGTCGGTAAGCTGGATATGTCGGATGTAAAAATCGGTGACAGTATTGCCTGTAATGGGGTGTGTTTGACTGCAATTGAGT
TAACCCCCTCTGCCTATGTAGCGGATGTGTCGTCAGAAACATTAAAGGTTACCACCTTAGGTGCTTTGAAAGTCGGTTCT
CCAGTTAATCTGGAAAAAGCGTTACGCCTTCAAGATCGTTTGGGGGGACACTTGGTTAGCGGGCATGTCGATGGCGTCGG
GAAGGTGCTATCGATTACCCAGGAAGCACGTTCTTGGCGTTACCAAATTGAAGCCCCCGTTGCGTTGGCGAAATACATTG
CAGGTAAAGGCTCGATTTGCATTAACGGCATTAGTTTGACGGTGAACCAAGTCGATGGCTGCGCGTTTGATGTCAACATT
GTGCCGCATACCCGACAAGAAACAACGATTAAACATTTCCAAGTGGGAACAACCGTTAATCTGGAAGTGGATTTGCTGGC
GCGCTATTTAGAAAGAATGTTAAGCGCGCCGAAAGACACGGAACAATCAGATACAAACCCGTCTAAAATCACGCGTGAAT
TATTATCCGATCGCGGTTTTTTGTAA

Protein sequence :
MFTGIIETEGFVSRIEPVNGDARMTIEVGKLDMSDVKIGDSIACNGVCLTAIELTPSAYVADVSSETLKVTTLGALKVGS
PVNLEKALRLQDRLGGHLVSGHVDGVGKVLSITQEARSWRYQIEAPVALAKYIAGKGSICINGISLTVNQVDGCAFDVNI
VPHTRQETTIKHFQVGTTVNLEVDLLARYLERMLSAPKDTEQSDTNPSKITRELLSDRGFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00291 YP_008207756.1 Riboflavin synthase alpha chain Not tested AbaR25 Protein 4e-48 53
BJAB0868_00295 YP_008211621.1 Riboflavin synthase alpha chain Not tested AbaR26 Protein 4e-48 53