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Name : Tcr_1185 (Tcr_1185) Accession : YP_391454.1 Strain : Thiomicrospira crunogena XCL-2 Genome accession: NC_007520 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 1294588 - 1296231 bp Length : 1644 bp Strand : + Note : - DNA sequence : ATGACTTCAAAACAACCCGTTTTAAGTGTTGAAAACCTAACCATCAGAGTGGGTGTCAATGAACTGGTCAAACGAATCAG TTTCGAGATTCAACGGGGTGAAATTTTTGCACTTGTCGGTGAGTCCGGCAGTGGTAAATCATTAACCTCTTTAGCCATTA TGCGGTTATTGCCTGAAGCCTTAGACATTGCTGACGGCAAAGTCTTGCTAAACGAACAAAGCCTTTTCACACTGCCTGAG AACAGAATGCAGCGCATTCGTGGTCAGCAGGTGGCGATGATCTTTCAAGAACCGATGACCTCACTGAACCCGGTGATGAA GGTGGGTGAACAGGTTGCTGAAGTCTTGCGTATTCATTTAAACATGCACCGTAGCCAAGCCCGTGAAAAGGTCATTGCAC TGTTTGAAGAAGTGGGCATTCCAGAACCGGAATCACGTTACGACTGGTACCCACATCAGTTATCAGGTGGGCAAAAACAA CGTGTGATGATCGCAATGGCTTTAGCCTGTGAACCGGACTTGCTGATTGCCGATGAGCCCACAACCGCTTTAGATGTGAC GATTCAGGCCCAAGTATTAAAACTGCTAAAGAAAATTCGAGATGAACGCGGCCTGGCGATTTTATTCATCACGCACGATA TGGGCGTCGTCAATGAAATGGCGGATCATGTCGCTGTCATGCGTCAAGGTGAAATCGTCGAACAAGCGGATAAAGCGCAT TTTTTCACCGCTCCGACGCATCCTTATACACGTAAATTACTGGAAGATGCGGTTCCAAAACACACTTATAAACCGGTTTC AGATACAAAAAATCTACTTCAAATCAATGATTTAAAAGTGCACTTTCCTATAAAAAAGGGCATTTTCCAACGTACCGTAG GCTATGTCAAAGCGGTGGACGGCGTGACATTATCCATTGCAAAAGGGGAGACCTTAGCTTTGGTGGGCGAATCCGGCAGT GGTAAAAGCACCATTGGGCAGGCCATTTTACGTTTAATAGACACCACCGATGGCTCGGTTGTTTTTCAGAACAACGAACA AGGCATTGATTTTATTAATTTAAATGAAAAAAACATGAAACCCTTGCGCAAAAAGGTGCAAGTGATTTTTCAGGATCCTT TCTCAGCATTGAACCCGAGAATGCAAATCAGTGACATTATTCGTGAAGGAATGAACAGCTTGAACGTTGGGCCAAAAGGG CGCGAGGCACAAGATCAACGAATTGATGATTTATTGCAGCAAGTGGGACTGTTGCCGGAACACAAATATCGTTATCCACA TGAATTCTCGGGCGGCCAACGTCAACGAATCGGTATTGCACGCGCGTTGGCCGTGGAGCCGGAATTGATTATTTGCGATG AGCCGACCAGTGCCTTGGATGTTTCTGTTCGAGCACAGGTATTGGATTTACTTAATGATCTGCAAAAAACCTATCAAATG TCTTACTTATTCATCACCCATGACTTATCCATTATTCCGGCCATTGCGCATAAAGTGGCGGTAATGAAGCAAGGAAAGAT TGTCGAGCAAGGCAATGTAGAAGCCATTATGTGCAACCCACAACATAAATACACTCAAAAACTCTTAAATTCGGCACCGG AATTGATCAAAAAAGCCTTTAACGACCAACCGATTGCCCGTTAA Protein sequence : MTSKQPVLSVENLTIRVGVNELVKRISFEIQRGEIFALVGESGSGKSLTSLAIMRLLPEALDIADGKVLLNEQSLFTLPE NRMQRIRGQQVAMIFQEPMTSLNPVMKVGEQVAEVLRIHLNMHRSQAREKVIALFEEVGIPEPESRYDWYPHQLSGGQKQ RVMIAMALACEPDLLIADEPTTALDVTIQAQVLKLLKKIRDERGLAILFITHDMGVVNEMADHVAVMRQGEIVEQADKAH FFTAPTHPYTRKLLEDAVPKHTYKPVSDTKNLLQINDLKVHFPIKKGIFQRTVGYVKAVDGVTLSIAKGETLALVGESGS GKSTIGQAILRLIDTTDGSVVFQNNEQGIDFINLNEKNMKPLRKKVQVIFQDPFSALNPRMQISDIIREGMNSLNVGPKG REAQDQRIDDLLQQVGLLPEHKYRYPHEFSGGQRQRIGIARALAVEPELIICDEPTSALDVSVRAQVLDLLNDLQKTYQM SYLFITHDLSIIPAIAHKVAVMKQGKIVEQGNVEAIMCNPQHKYTQKLLNSAPELIKKAFNDQPIAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-92 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-92 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-92 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-92 | 42 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 8e-98 | 42 |
