Gene Information

Name : Tcr_0110 (Tcr_0110)
Accession : YP_390380.1
Strain : Thiomicrospira crunogena XCL-2
Genome accession: NC_007520
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : 4.3.2.1
Position : 140246 - 141634 bp
Length : 1389 bp
Strand : -
Note : catalyzes the formation of arginine from (N-L-arginino)succinate

DNA sequence :
ATGAGCAATCAACACAATCAAGAAAAACTTTCCAGCGCACGTTTCAGCGAAGCAACTGATGCGTTTGTAGAAGAATTTAC
TGCATCTATTCAGTTTGATAAACGCATGTATCGTCAAGATATCCAAGGGTCTGTTGCCCATGCCAAAATGTTACATAAAG
TCGGCATATTGGACAAACAAGAATTAAAAGACATTATTGACGGCTTGGAAAAAGTTCAATCCGACATTGAGGCCGGAAAA
ATGAACTGGTCCATTAAGCAAGAAGATATTCACATGAATATCGAAGCAAAACTGACTGAACTGATTGGCATTACCGGTAA
AAAGCTGCATACCGGGCGTTCTCGTAATGATCAAGTAGCGACCGATATCCGCTTGTATTTACGTGATGAAATTGATGCCA
TCCTGCCGGAAATGGCCCGTCTGCAACATGGCATTTTATTATTGGCCGAAAAAGAAGCCGAGACCATTATGCCTGGCTTC
ACCCATCTTCAGACAGCGCAGCCCGTCACCTTTGGTCACCATATGATGGCTTGGTTTGAAATGATCAAACGCGACGTAGA
ACGCTTGGAAGATTGCCGTAAACGAGTCAATACCATGCCATTAGGCTCTGCGGCTTTGGCTGGAACAACCTACCCTATCC
AACGAGAATACACTGCGGAATTACTGCAGTTTGATCGCATCTCGGAAAACTCTTTAGACGGCGTTTCAGATCGAGATTTT
GCCATTGAGTTTACCGCATTTGCGGCAACCTTTTTAATGCATCTGTCTCGTTTTTCAGAAGAGTTGGTGCTTTGGTCATC
CGCACAGTTTAACTTTATTGATTTACCGGATCGTTTCTGCACCGGTTCGTCGATCATGCCACAAAAGAAAAACCCGGATG
TTCCTGAACTGGTACGTGGTAAAACTGGCCGTGTTTATGGCCACCTGATGAGTTTGTTGACGTTAATGAAATCACAACCA
TTGGCGTACAACAAAGATAATCAGGAAGATAAGGAACCGTTGTTTGATACGGTGGATACCGTCAAAGGAAGTTTGCGAGC
GTTTGCAGACATGGTGCCAGCGATCATTGTGAACCGTGAAGCGACTTATGCGGCCGCAAAACAAGGTTTTTCCACTGCGA
CCGATTTAGCGGATTACTTAGTCAACAAAGGACTGCCTTTCCGTGATGCGCATGAAGTCGTTGGACTGGCGGTCGCACAT
GGCATTCAAACAGGGCAGGACTTGTCTGAAATGCCTTTAGAAACGCTGCAAGCTTTCCACAGTAGCATAACCGATGATGT
GTTTGAGGTTCTAACGCTAGAAGGATCGGTTTCGGCACGCGATCATTTAGGCGGTACAGCCCCAAAACAAGTCAAAGCAG
CGATTAAACGTGCAAAAGATCGTTTATAG

Protein sequence :
MSNQHNQEKLSSARFSEATDAFVEEFTASIQFDKRMYRQDIQGSVAHAKMLHKVGILDKQELKDIIDGLEKVQSDIEAGK
MNWSIKQEDIHMNIEAKLTELIGITGKKLHTGRSRNDQVATDIRLYLRDEIDAILPEMARLQHGILLLAEKEAETIMPGF
THLQTAQPVTFGHHMMAWFEMIKRDVERLEDCRKRVNTMPLGSAALAGTTYPIQREYTAELLQFDRISENSLDGVSDRDF
AIEFTAFAATFLMHLSRFSEELVLWSSAQFNFIDLPDRFCTGSSIMPQKKNPDVPELVRGKTGRVYGHLMSLLTLMKSQP
LAYNKDNQEDKEPLFDTVDTVKGSLRAFADMVPAIIVNREATYAAAKQGFSTATDLADYLVNKGLPFRDAHEVVGLAVAH
GIQTGQDLSEMPLETLQAFHSSITDDVFEVLTLEGSVSARDHLGGTAPKQVKAAIKRAKDRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 4e-159 71
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 4e-159 71