Gene Information

Name : Dde_1032 (Dde_1032)
Accession : YP_387528.1
Strain : Desulfovibrio alaskensis G20
Genome accession: NC_007519
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 1058438 - 1059850 bp
Length : 1413 bp
Strand : -
Note : TIGRFAM: Pyruvate kinase; KEGG: dvm:DvMF_0965 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta

DNA sequence :
ATGAGAACGAAAATAATCGCAACAGTGGGCCCTGCCTCTTCGGGCCGGGAAACCCTCTCACGGCTGATTCAGGCCGGAGT
ACGCATATTCCGGCTCAATTTTTCACATGGTGACGCCTCGCAGTTTGTTGATTTGATTGCTCTCATGCGACAGCTGGAGG
CGGAATACCAGACACCCATAACCCTGCTGCAGGATCTTTCCGGCCCTAAAATCCGTATAGGTGAACTGCCGGACGGCGCC
CTGACGCTGGCAAAGGACGACCGTATCCTGCTGGGCATTCCCGGCAAGGCGGCGGCAGACGGATTACCCTTCGTTCCGTT
CACGCACAAGACAATTCTTGACGGCATGGAACCGGGCGACAGGGTGGTGCTGAGCGACGGCGGACTGCAGTTCCATGTGG
AAAGCAAGGTCGGCCCCGATCTGTTCTGTCTGGTGGCAAACAACAGCGGTATCATAACCTCGCGCAAGGGCCTTGCCCTG
CCGGGCAAGCCTATCCACCTGGCCGCCCTGACCGAAAAAGACAAAAAAGATCTGCAGGACGGGCTGCGCATGGGCGTGGA
TGCCGTGGCGCTTTCGTTTGTGCAGACGCCCGAAGATGTGGCCGAAGCCAAGGCACTCATCAAGGCGGCAGGCCGCAACG
TGCCTGTAATTGCCAAACTGGAACGGCGCAACGCCGTGGACAGGCTGGAAGAAATTCTGGAAGTGACAGACATTGTCATG
GTGGCCCGCGGCGATCTGGGTGTGGAATGCCCCCTGCCCGAGCTGCCCGCCATGCAGAAGCGCATCATCCGCGCCTGCAA
CCGCAAGGCAAAACCGGTTATCGTTGCCACGCAGATGCTGCTTTCCATGGTCAACAGCCCCAGCCCCACCCGCGCCGAAA
CCACTGACGTGGCCAACGCGGTGCTGGACGGTGCCGACTGCGTGATGCTGTCGGAAGAAACGGCCATGGGCAACTTCCCT
GTGGAGACGGTTCAGTTCATGCGGCAGATAGTCCGCGCGGCCGAAGAGCTGCATCTGGAGCAGTCTTCTGTGCTGCCCCC
GCTTGATGAGCAGAAGACACCTGATTTTCTGGCCTATTCCGCATGTCTGCTGGCCGACAAGACCTGCGCGGGTGCCATCG
TGGCACACAGCATGTCCGGCAGCGCGGCACGGGTGCTATCCGCCCGCAGACCCCGTCAGACCATCCATGCGCTTACTCCC
GATGACGAAGCGCTGCGCTTCCTCAACTTTTCATGGGGCGTATGGCCCCACAAGGTTGATGAAACACTGCCGGGTCATCT
TGAGCGTGCCGAACTCTTTGTGGACAACGCGCCGCAGTTTGAAGACGGGGCCGAAGTGGTGATAACAGCAGGACAGCCCA
AGCCCGGTGAAAAACCCCGCGGCACCAACCTGGTAAAAATATACAGAAAATAG

Protein sequence :
MRTKIIATVGPASSGRETLSRLIQAGVRIFRLNFSHGDASQFVDLIALMRQLEAEYQTPITLLQDLSGPKIRIGELPDGA
LTLAKDDRILLGIPGKAAADGLPFVPFTHKTILDGMEPGDRVVLSDGGLQFHVESKVGPDLFCLVANNSGIITSRKGLAL
PGKPIHLAALTEKDKKDLQDGLRMGVDAVALSFVQTPEDVAEAKALIKAAGRNVPVIAKLERRNAVDRLEEILEVTDIVM
VARGDLGVECPLPELPAMQKRIIRACNRKAKPVIVATQMLLSMVNSPSPTRAETTDVANAVLDGADCVMLSEETAMGNFP
VETVQFMRQIVRAAEELHLEQSSVLPPLDEQKTPDFLAYSACLLADKTCAGAIVAHSMSGSAARVLSARRPRQTIHALTP
DDEALRFLNFSWGVWPHKVDETLPGHLERAELFVDNAPQFEDGAEVVITAGQPKPGEKPRGTNLVKIYRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 6e-49 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 6e-49 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 4e-48 42
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 7e-49 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dde_1032 YP_387528.1 pyruvate kinase VFG0479 Protein 3e-49 42