Gene Information

Name : Dde_0670 (Dde_0670)
Accession : YP_387166.1
Strain : Desulfovibrio alaskensis G20
Genome accession: NC_007519
Putative virulence/resistance : Resistance
Product : acriflavin resistance protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0841
EC number : -
Position : 684908 - 687940 bp
Length : 3033 bp
Strand : -
Note : PFAM: Acriflavin resistance protein; KEGG: dsa:Desal_0071 acriflavin resistance protein

DNA sequence :
ATGAACATTGCGGAATTCTGCATCGGCAAGCGCACGGTAAGTCTTGTACTTACGCTGGCGCTGACCGTGGGCGGCATACT
GGCCTATATGAAGATGGGCAGGCTGGAAGACCCTGCATTCACCATCAAGGATGCGCAGGTAATCACCACCTATCCGGGAG
CCCTGCCCGCCGAGGTTGCGGAAGAAGTGACCGACGAGCTGGAAAGCGCCATCCAGCAGCTGGGGCAGCTCAAGCGCATC
GAATCGGTATCCATGCCGGGCATGTCCATCATCACCATGCGCATAAAAGACAAATACGGCCCCGAGCTGCTGCCGCAGGT
GTGGGACGAACTGCGCCGCAAAGTCAACGACGCCAGAGCCAAACTGCCTCCCGGTGCGGGCGACCCGCTGGTGGTGGACG
ACTACGGCGACGTCTACGGTATTTTTCTGGCTGTGACGGCTGACGGTTTTTCCTACAAGGAACTCAACGACTATACGGAT
TTTCTGCGCAAGGAACTGCTCATGGTTCCCGATGTGGCCAAGGTCACACTGTGGGGCACTCAGCAGGAAGCCATATATGT
GGAAATCTCGCGCGCACGCATGCGCAGCATGGGGGTTTCTCTCAATACCGTGTACGACGCGCTGAAGGAAAACAACCTTG
TGGTCGATTCGGGCCACGTGCGCGCGGGCCCCGATTACGTACGCATTCATCCCACCGGCGAAATCCGTTCCGTGGAAGAG
CTGGGCAATCTGTTCATCAACGACCCCGCCGCCCCGCGGCTGGTGTATCTGAAAGACATAGCCACCATACGGCGCGACTA
TGTGCAGCCGCCCACAACCATCATGCGCCACAACGGCAGAATGGCTGTGGCCGTGGGCATTTCGCTGGCTCCCGGCGGCA
ACATAGTCACACTGGGCGAACGCGTGGACAAGCGCCTTGCAGAACTGGACGGCGTGACCCCCGTGGGCATCAACATCGAC
AAAATATATTTCCAGCCGGACTATGTGACCAAGGCGGTGAACAACTTTGCCGTCAGCCTGCTGGAAGCCATTGCCATCGT
CATCGGCGTGCTGATGATTTTCATGGGGCTGCGCAGCGGCATTCTCATCGGCGCCATTCTGCTCATCACCGTCTGCGGGT
CGTTCATTTTCATGAAGATGATGGACATCGAACTGCAGCGCATATCGCTGGGGGCGCTTATTATCGCGCTGGGCATGCTG
GTGGATAACGCCATCGTGGTCACCGAAGGAATGCTGATACGCATCCAGAAAGGGGACAACCGGCTGGAAGCGGCGCGCGA
CGTGGTAAAGCAGAACATCTGGCCGCTGCTGGGCGCCACCGTCATCGCCATCATGGCATTTTCGGCCATCGGCCTTTCAG
AAGACAATACCGGAGAATACTGCGGCTCACTTTTCTGGGTGCTGCTCATCTCCCTCATGCTCAGCTGGGTCACAGCCATC
ACCATCACGCCGCTGTTCTGCGAAATGTTTCTCAAAGGCGGTGAAGACACTGCGAAAGATCCCTACGGGGGCATCATCTT
CCGCAGCTACCGCGCCCTGCTGGACAAATGCCTCCATTACCGCTGGTTCACCGTCGGCACCATGGTTGTGCTGCTGGGGT
TGTCCGTGGCCGGTTTCGGCCTGCTGGAACAGAGCTTTTTCCCGCCTTCAACCCAGCCGCAGTTTCTGCTCGACTACTGG
AAGCCTGAAGGAACCGACATACGCACCACCAGTGCAGACATGCACCTGATGGAAGAAGCCCTGAAAAAAGACGACCGGGT
GGCTTTTACCAGCAGCTTTGTGGGCGGCGGTGCCCCGCGTTTCATGCTTGTTTATGCACCGGAAAAAAAATACCCCAACT
ACGGGCAGATAATCGTCACCGTCAAAGATTACCGGCAGATTGATTCCATAATAGCAGATTACCGCCCCGAACTGGAGGAG
CGGTTCCCCGCGGCGTTCTTTAAATTCAAGAAAATCCGTCTGGGCCCCGGCAGAGACGACCCCATCGAAGTGCGTTTCAG
CGGGCCCGACCCCGAAGTTCTGCGACGGCTTTCGGTACAGGCGCAGGAACTGATACGCGCCAACCCCAATGCCCGCGGCA
TACGCGACAACTGGCGCCAGAAAGTCAAGCAGGTTGTCCCCGTGGTCAACGATGCCTCCGCCCGCAGGGCAGGCATCACA
CGTCCGGACATCGCCACCGCGCTGCGCACCGCATCATCCGGCACCACTGTGGGTATCTACCGCGAAGATGACACCCTTAT
TCCCATCATCGCGCGGCCGCCGGCGGACGAAATGAACGACGCATCGCGGCTTGCCGACGTGCAGGCGTGGAGCCCCACCG
CCAAAGCCATGATTCCCGTGGGGCAGCTTGTCTCTTCGTTTGAAACCCGCATGGTCGACAACATCAGACAGTCACGCTTC
CGCAAGCCGACCATCACGGTGGCGTGCGAGCAGGTTTCCGGCCAGCCCAGTGCACTGTTCAAAGAACTGCGGCCGGTGCT
GGAATCCATGCCGCTGCCCCGCGGATACACACTGGAATGGGGCGGCGAGTATGAAGACAGCCGCGACGCACAGGCCGCGC
TGTTCAGTTCCATACCGCCCACGCTGGCCATGATGGTGCTTATCACCGTCATGCTGTTCAACGCGCTGCGCCAGCCGCTT
ATCATCTGGCTTACCGTGCCGCTGGCTTTCATCGGCGTCACATGGGGGCTGCTGGCCGCCGGACAGCCATTCGGCTTCAT
GGCCCTGCTCGGATTCCTGAGCCTTTCCGGAATGCTCATTAAAAACGCCATCGTGCTGCTGGACGAAATAGACACCCAGA
TACGGTCCGGCAAAGACAGGTACCATGCCATTCTGGACTCTTCGGTCAGTCGTATGCGGCCGGTTCTCATGGCTGCCAGC
ACCACCGTGCTGGGCATGCTGCCGCTGCTTACCGATGCGTTTTTTGTGGCCATGGCGGTGACAATCATGGCAGGTCTCAC
CTTTGCCTCCATTCTCACCCTCATCGTAGTGCCGGTGCTGTACTCCATCTTCTTCCGCATCAGGGCGGCGTAA

Protein sequence :
MNIAEFCIGKRTVSLVLTLALTVGGILAYMKMGRLEDPAFTIKDAQVITTYPGALPAEVAEEVTDELESAIQQLGQLKRI
ESVSMPGMSIITMRIKDKYGPELLPQVWDELRRKVNDARAKLPPGAGDPLVVDDYGDVYGIFLAVTADGFSYKELNDYTD
FLRKELLMVPDVAKVTLWGTQQEAIYVEISRARMRSMGVSLNTVYDALKENNLVVDSGHVRAGPDYVRIHPTGEIRSVEE
LGNLFINDPAAPRLVYLKDIATIRRDYVQPPTTIMRHNGRMAVAVGISLAPGGNIVTLGERVDKRLAELDGVTPVGINID
KIYFQPDYVTKAVNNFAVSLLEAIAIVIGVLMIFMGLRSGILIGAILLITVCGSFIFMKMMDIELQRISLGALIIALGML
VDNAIVVTEGMLIRIQKGDNRLEAARDVVKQNIWPLLGATVIAIMAFSAIGLSEDNTGEYCGSLFWVLLISLMLSWVTAI
TITPLFCEMFLKGGEDTAKDPYGGIIFRSYRALLDKCLHYRWFTVGTMVVLLGLSVAGFGLLEQSFFPPSTQPQFLLDYW
KPEGTDIRTTSADMHLMEEALKKDDRVAFTSSFVGGGAPRFMLVYAPEKKYPNYGQIIVTVKDYRQIDSIIADYRPELEE
RFPAAFFKFKKIRLGPGRDDPIEVRFSGPDPEVLRRLSVQAQELIRANPNARGIRDNWRQKVKQVVPVVNDASARRAGIT
RPDIATALRTASSGTTVGIYREDDTLIPIIARPPADEMNDASRLADVQAWSPTAKAMIPVGQLVSSFETRMVDNIRQSRF
RKPTITVACEQVSGQPSALFKELRPVLESMPLPRGYTLEWGGEYEDSRDAQAALFSSIPPTLAMMVLITVMLFNALRQPL
IIWLTVPLAFIGVTWGLLAAGQPFGFMALLGFLSLSGMLIKNAIVLLDEIDTQIRSGKDRYHAILDSSVSRMRPVLMAAS
TTVLGMLPLLTDAFFVAMAVTIMAGLTFASILTLIVVPVLYSIFFRIRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1355 YP_001217299.1 AcrB/AcrD/AcrF family transporter Not tested VPI-2 Protein 0.0 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dde_0670 YP_387166.1 acriflavin resistance protein BAC0519 Protein 0.0 54
Dde_0670 YP_387166.1 acriflavin resistance protein BAC0428 Protein 0.0 53
Dde_0670 YP_387166.1 acriflavin resistance protein BAC0526 Protein 0.0 48
Dde_0670 YP_387166.1 acriflavin resistance protein BAC0425 Protein 0.0 46