Gene Information

Name : Dde_0477 (Dde_0477)
Accession : YP_386973.2
Strain : Desulfovibrio alaskensis G20
Genome accession: NC_007519
Putative virulence/resistance : Unknown
Product : transposase IS200-family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 487111 - 487497 bp
Length : 387 bp
Strand : +
Note : PFAM: Transposase IS200-like; KEGG: yen:YE1694 transposase for IS1541

DNA sequence :
ATGGGTGACGCTAAGAGTTTAGCCCACACAAAATGGAACTGCAAATATCACGTAGTGTTTGCGCCAAAGTATCGGCGGCA
AGTTTTTTACGGGGAGAAGAAGCGCGCAGTGGGTGAGATATTGCGCAAACTGTGTGAGTGGAAAGGCGTACATATAGTCG
AAGCAGAATGCTGCCCCGATCATGTACATATGCTTCTTGAAATACCGCCAAAGATGAGTGTTTCAAGTTTTATGGGATAC
TTGAAAGGAAAAAGCAGTTTAATGTTGTATGATCAATTTGGCGATCTGAAGTTTAAATACCGGAATCGCGAGTTTTGGTG
CCGTGGATATTATGTAGATACAGTTGGAAAAAACAAGGCAAAGATACAAGATTACATTAAGCATTAA

Protein sequence :
MGDAKSLAHTKWNCKYHVVFAPKYRRQVFYGEKKRAVGEILRKLCEWKGVHIVEAECCPDHVHMLLEIPPKMSVSSFMGY
LKGKSSLMLYDQFGDLKFKYRNREFWCRGYYVDTVGKNKAKIQDYIKH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 1e-55 90
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 8e-42 70
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 8e-42 67
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 2e-31 56
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 3e-31 56