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Name : Dde_0042 (Dde_0042) Accession : YP_386538.1 Strain : Desulfovibrio alaskensis G20 Genome accession: NC_007519 Putative virulence/resistance : Unknown Product : S-adenosylmethionine--tRNA ribosyltransferase-isomerase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0809 EC number : - Position : 33471 - 34613 bp Length : 1143 bp Strand : + Note : KEGG: dvl:Dvul_0043 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: Queuosine biosynthesis protein; PFAM: Queuosine biosynthesis protein DNA sequence : ATGCATTCCAAGCATCCCACAGATACGGCCCGCCGCTGCGAGACAGGCACTGACAGCAGCGATACCGCCGCAGACGACTA CTCTCTTGCCGGATACCGTTTTGAACTGCCCGAAGAACAGATAGCGCAGCATCCGCCGGAACACCGCGGGGCTTCGCGGC TTTTTGTCATGGACAGGAAGTCCGGTGTTAACACACAGGCTTCTTTTAAGGATATAGGCAGCTTTTTGCCCGAGGGCGCC CTGCTGGTGGCCAACAACTCGCGCGTGCTGCCCGCGCGCATGCTGGGCAGACGCCCCACCGGCGGCAAGGTGGAATTTCT GCTGCTTACTCCGCTGCCGCTGGTACAGCCGCAGACCGGTACAGACGGCCGCAGCTGTGCAGAGGCAGAAGGTCTTCTGA GAGCTTCCAAACGGGTGCGGCCTGGTGATGTCATGCATTTTGACGGGCTGGACGTTGAGGTGCTGCACACTGCCGACTTC GGCCGCTGTGCGGTGCGCATGCACTGGAAAGGCGACCTTGCCGGACTGTTCCTGCGGCAGGGGCATCTGCCGCTGCCTCC GTACATCCGCAGGCCCGACGGAGAAGATGACCACAGCAGATACCAGACCGTGTACAGCAGGCAGGACAGACTGGGCTCGG TGGCGGCACCCACCGCGGGGCTGCATTTCACGCCGGAGCTTACGGCGTCGTTGCAGGAACAGGGATTCGGCTGGGCCGAG GTCACGCTGTATGTCGGCTACGGCACGTTCAGCCCCGTCCGCGCAGAGGATATCCGTACCCATACCATGCACCGCGAGTA CATGGAAATAACGGAGCAGGCCGCACAGGCCATAAACGATGCAAAACGGCAGGGCCGGCCGGTGGTCACGGTGGGCACCA CATCCACAAGGGTGCTGGAAGGGGCATGGGCCGCATGCGGAGAAATTCGTCCTTTTACCGGCTGGACGGACATTTTTATC TATCCGGGGTACCGCTTTAACGTGGCCGACCACATCATCACCAATTTTCATCTGCCGGAATCGTCATTGCTTATGATGAT ATCGGCTTTTGCCGGGCGCGAAAAAACCCTGCAGGCCTACAGTCAGGCCGTGGCTGCAGGGTACCGCTTTTTCTCATACG GCGACGCCATGCTTATTCTGTAA Protein sequence : MHSKHPTDTARRCETGTDSSDTAADDYSLAGYRFELPEEQIAQHPPEHRGASRLFVMDRKSGVNTQASFKDIGSFLPEGA LLVANNSRVLPARMLGRRPTGGKVEFLLLTPLPLVQPQTGTDGRSCAEAEGLLRASKRVRPGDVMHFDGLDVEVLHTADF GRCAVRMHWKGDLAGLFLRQGHLPLPPYIRRPDGEDDHSRYQTVYSRQDRLGSVAAPTAGLHFTPELTASLQEQGFGWAE VTLYVGYGTFSPVRAEDIRTHTMHREYMEITEQAAQAINDAKRQGRPVVTVGTTSTRVLEGAWAACGEIRPFTGWTDIFI YPGYRFNVADHIITNFHLPESSLLMMISAFAGREKTLQAYSQAVAAGYRFFSYGDAMLIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| queA | AAF71483.1 | QueA | Not tested | Hrp PAI | Protein | 7e-62 | 45 |
| queA | AAT96182.1 | QueA | Not tested | T-PAI | Protein | 9e-57 | 45 |
| queA | AAF71490.1 | QueA | Not tested | Hrp PAI | Protein | 5e-57 | 45 |
| queA | AAT96106.1 | QueA | Not tested | T-PAI | Protein | 1e-57 | 45 |
| queA | AAT96070.1 | QueA | Not tested | T-PAI | Protein | 1e-57 | 45 |
| queA | AAT96042.1 | QueA | Not tested | T-PAI | Protein | 1e-57 | 45 |
| queA | AAT96122.1 | QueA | Not tested | T-PAI | Protein | 9e-61 | 45 |
