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Name : Dde_0360 (Dde_0360) Accession : YP_386856.1 Strain : Desulfovibrio alaskensis G20 Genome accession: NC_007519 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 348717 - 350666 bp Length : 1950 bp Strand : - Note : PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: dsa:Desal_3620 polysaccharide biosynthesis protein CapD DNA sequence : ATGCGAATAGCACTGCGCACCGCCAACTTCTACATCATGATGTGCGTGGACCTGCTGTGCTTTGCAGCCGCGCTGTACGC CGCCTATATGCTGCGGTTCGACTTTTCCATTCCCTATCTGCATGTCGAACGCATGAAAGGACTGCTGCCATGGGTACTGC CCATGAAGCTCGCCGTGTTCGTGGTATTTTCCATGTACCGCGGCATGTGGCGCTACACCAGCCTGCGCGACTCCATACTG CTGCTGCGCGCCGCAAGCGTGCAGAGCCTGCTTGTCATCGCAGGGGTGGCATACCTTACCGGATTTGCGGGCTATTCACG CGCCGTCTTCGGCATGGACTTTCTGCTTACCTTTCTGTTCACCGGCGGCGCGCGTCTGGGTATCCGCATTCTGTTCTCCC TGCGCGAGACAGGGCGCTTCTGGCTGCCCATGACGGGCCGCACCGCGCGCAAGGGAGCCAGAAGGGTCATCATAATCGGC GCCGGCAGAGCCGGAGAACGGCTGGTCAGCGAACTGAACCGTGATGTGTCGCTGGGCTACTTCCCCGTGGGGTTCGTGGA CAACAACCCCGCCCTGAAAGGCAGAACCATCCACGGCCGTCCCGTCATGGGCACGCTGGACCGCCTGCCCGAAGCCATTG TCTCCACCCGTGCCGAAGAACTGCTCATCGCCCTTACGGAAGCTTCTTCCGAGCAGGTGCGCCACATAGTGCAGGCCTGT TCGGAAACGGGTCTGCCCTGCAAAATACTGCCGCCCATGAACGAAATTCTGGATTTCAAACGCGGCATAAAAAACATGCG CGAGGTCAACTACCTCGACCTGCTGGGCCGGTCGCCGGTGGAACTGGATACCGGAGCCATCAGCCGCTACCTGCAGGGCA AATGCATTCTGGTCACCGGCTGCGGCGGCTCCATAGGATCAGAGCTGGTCAGGCAGATTATCCGGTATGCTCCCGCCCGT CTGGTGCTGGTGGATGCCAGCGAATTCAATCTGTATAAAATACAGATGGATCTTGAACACGTACACGGCTTTCACGACTA TGTGGCCATACTGGGCAATATCCGCGATGCCCACCTGATGCGCACCACATTTGCCGCACACAAACCAGAGGCTGTCTTCC ACGCCGCGGCGTACAAGCATGTGCCCATGCTTGAGCGTAACCCGTGGCAGGCCGTGCAGAACAATATTCTGGGCACCCAG ACACTCATGCAGGCCGCCCACGATGCCGGAGTGCAGCGTTTTGTGGTGGTCTCCACCGACAAGGCGGTACGCCCCACCAA CGTCATGGGGGCTTCCAAGCGGGTAACAGAACTGCTCATGCGCAGGTTCTCCGGCAGTTCCACACGGTTTATGGCCGTGC GCTTCGGCAATGTGGTCGGGTCGTCCGGCTCCGTTGTGCCGCTGTTTCTCGACCAGATTGCCAGAGGCGGCCCCGTCACG GTCACGCATCCCGAAGTAACCCGATACTTCATGTCCATTGCCGAAGCCGCGCAGCTTATTCTGCAGGCGGGCACCATGGC GCAGGGCGGCGAGATATTTGTGCTGGATATGGGGGTACCTGTCAAAATAGCAGATATGGCCAAAGACCTTATCCGCCTTG CCGGACTGGAACCCGAAGTGGATATTCCCATTGTCTTCACCGGCCTGCGCGAAGGTGAAAAACTGTACGAAGAGCTGATT ACCGCTGACGAAGGCGTGGTGCGCACCGAGCATGACAAGATTATGGTGCTGCGCTGCTGTGACAGCGCCCAGATATCTGA AAGCGCCCTGCAGACTCTGGAACAGGGCCTGCAACAGGCCGTGCAGGCAGCACAGGCGCACGACGGTGCAGCAGTGCGCA GAGCGCTGCATGTGCTGGTGCCCGAATACACCGAAGTTGAACATACGCACACAGAGACCGGCGCGTCTGGCGCGCCGGAA CCTGCCGCACTCCGGCCGGAACCTGCGTGA Protein sequence : MRIALRTANFYIMMCVDLLCFAAALYAAYMLRFDFSIPYLHVERMKGLLPWVLPMKLAVFVVFSMYRGMWRYTSLRDSIL LLRAASVQSLLVIAGVAYLTGFAGYSRAVFGMDFLLTFLFTGGARLGIRILFSLRETGRFWLPMTGRTARKGARRVIIIG AGRAGERLVSELNRDVSLGYFPVGFVDNNPALKGRTIHGRPVMGTLDRLPEAIVSTRAEELLIALTEASSEQVRHIVQAC SETGLPCKILPPMNEILDFKRGIKNMREVNYLDLLGRSPVELDTGAISRYLQGKCILVTGCGGSIGSELVRQIIRYAPAR LVLVDASEFNLYKIQMDLEHVHGFHDYVAILGNIRDAHLMRTTFAAHKPEAVFHAAAYKHVPMLERNPWQAVQNNILGTQ TLMQAAHDAGVQRFVVVSTDKAVRPTNVMGASKRVTELLMRRFSGSSTRFMAVRFGNVVGSSGSVVPLFLDQIARGGPVT VTHPEVTRYFMSIAEAAQLILQAGTMAQGGEIFVLDMGVPVKIADMAKDLIRLAGLEPEVDIPIVFTGLREGEKLYEELI TADEGVVRTEHDKIMVLRCCDSAQISESALQTLEQGLQQAVQAAQAHDGAAVRRALHVLVPEYTEVEHTHTETGASGAPE PAALRPEPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-79 | 42 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 8e-79 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dde_0360 | YP_386856.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 6e-72 | 42 |
