|
Name : Dde_3413 (Dde_3413) Accession : YP_389901.1 Strain : Desulfovibrio alaskensis G20 Genome accession: NC_007519 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3372738 - 3375587 bp Length : 2850 bp Strand : + Note : KEGG: mfa:Mfla_1170 ATPase AAA-2; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core DNA sequence : ATGGCCAGAAAACAATGCCAGGTCTGCGGCCAGCCCGCCACGGTGCGGGTGGAAGCCAATCTCAATGGTCGCCACAGCAC CATGCTGTTGTGTGACGATCACTATCGCCAACTGGTGCGCCAGCAAAAGCGCACCGTCTCACCGCTGGAAGCCTTGTTCG GCTCGCGCAGCGGGCTGTTCGAAGACTTCCTTGGCAACGACTTCTTCCGCATCGGTGACGACGCACCGTCCATGACGGCC GATACCGACGAGGTCGTCGATGCCTCGTTCGGCGAACCCGCCCCGGCCGGTACGGGCACCGCGCGCCGTCGCGGCAGTGG GCTCGCCAGCCGTATCAGCGAACAGTCCGAGGCCCTGTTGCAGGAAGCCGCCCGACACGCTGCAGAGTTCGGGCGCGCCG AAGTCGATACCGAACACCTGCTGCTGGCGCTATCCGACAGCGACGTGGTCAAGACCATCCTGGGGCAGTTCAAGATCAAG GTCGATGACCTCAAGCGACAGATCGAATCCGAAGCCAAGCGCGGCGACAAGCCGTTCGAGGGCGAGATCGGCGTGTCGCC CCGGGTCAAGGACGCGCTCAGCCGTGCTTTCGTGGCCTCCAACGAACTCGGCCACTCTTATGTCGGGCCGGAGCATTTCC TGATCGGGCTCGCCGAGGAAGGCGAAGGTTTGGCGGCCAACCTACTGCGCCGTTACGGCCTCACGCCGCAAGCGCTGCGC CAGCAGGTAAGCAAGGTGGTCGGCAAAGGGGCCGAGGATGGCCGCGCCGAGACGCCGACCAACACGCCCGAGCTGGATAA ATACTCGCGCGACCTCACCAAGATGGCGCGCGAGGGCAAACTCGATCCAGTCATCGGCCGTGCGCAGGAGATCGAGACCA CCATCGAGGTGCTGGCCCGGCGCAAGAAAAACAACCCGGTGTTGATCGGTGAGCCCGGCGTCGGCAAGACCGCCATTGTC GAAGGACTGGCGCAGCGGATGGTCGCCGGCGAAGTGCCCGAGACGCTGCGCGGCAAGCGTCTGGTCGAACTCAACATCAA CGCCATGGTGGCAGGCGCCAAGTACCGCGGCGAGTTCGAGGAGCGCGTGCAGAAGGTGCTCAAGGAAGTGACCGAGCACC AGGACGAGCTGATTCTCTTCATCGACGAGGTGCACGCCATCGTCGGTGCAGGCCAGGGTGGTGGCGAAGGCGGGCTGGAC GTGGCCAACGTGTTTAAGCCGATGATGGCGCGCGGCGAACTGAACCTGATCGGCGCCACCACGCTCAACGAGTATCAGAA GTACATCGAAAAGGATGCCGCGCTGGAGCGCCGCTTCCAGCCGGTGATGGTGCCCGAGCCGACGGTAGCGCAGACCATGA TGATCCTGCGCGGCCTGCGCGACACCTTCGAGGCGCACCACAAGGTCAGCATCACCGAGGATGCGATCATCGCCGCCGCC GAGTTGTCGGACCGCTACATCACCGCGCGCTTTTTGCCTGACAAGGCCATCGACCTGCTCGACCAGGCGGCCGCACGCGT GAAGCTGTCGGCCACGGCCCGCCCGGTGGCGGTGCAAGAGCTGGAGTCCGAACTGCACCAGCTGCGGCGTGAGCAGGACT ATGTGGCCTCGCGCAAGCAGTACGACAAGGCCGCCGAGCTGGGCAAGCGCATCGAGGCCAAGGAGACTGAACTCAAGAAG CTCGTCGAGGAATGGGAACGCGAGCGCGCCTCGGGCAGCGCCGAAGTCAAGGCCGAGCATGTCGCGCAGATCGTCTCGCG CCTGACCGGCATTCCGGTCAACGAGCTGACGGTGGAAGAACGCGAGAAGCTGCTGCATCTGGAGCAGCGGCTGCATGAGC GCCTGGTGGGTCAGGACGAAGCGGTGCGCGCGGTGGCCGATTCCGTGCGGTTGTCGCGCGCGGGGCTGCGCGAGGGCAGC AAGCCGGTTGCTACTTTCCTGTTCCTCGGACCGACCGGCGTGGGCAAGACCGAACTCGCCAAGGCGCTGGCCGAGTCGAT CTATGGCGATGAAGGTGCGCTGCTGCGCATCGACATGTCCGAGTACGGTGAACGCCATACCGTGGCACGCCTGGTGGGCG CGCCTCCGGGCTATGTGGGCTATGACGAGGGGGGGCAGCTCACCGAGAAAGTGCGGCGCAAACCCTACAGCGTGTTGTTG CTCGATGAGATCGAAAAAGCGCACCCCGACGTCTACAACATCCTGCTGCAGGTATTCGACGACGGGCGGCTCACCGACGG CAAGGGCCGAGTGGTAGATTTCACCAATACCATCATCATCGCCACCTCGAACCTGGGCTCGGACATCATCCAACGTCGGC TGAAAGCCCGTGGCGCCGGCGGCGAGGAATACGTGAAGACCAAGTCCGAGGTGATGGACGTGCTGCGCGGACACTTCCGC CCCGAGTTCCTCAACCGCATCGACGAGATCATCGTCTTCCATGCGCTGGGCAAGGAGGAGATCCGCCATATCGTCGGCCT GCAGCTCGATCGTGTGGCCCGCAACGCCGCCAGCCAGGGCGTGACGCTGACCTTCGATCAGACCTTGATCGATCACTTCG CGGAGGAAGGCTACAAGCCCGAGTTCGGCGCGCGTGAGCTCAAGCGGCTGATCCGCAGCGAGCTGGAGACGGCACTGGCG CGCGAGATGCTGGGTGGCAGTATCGGCAAGGCCGATCACGCCAGCGCCCGCTGGGACGACAAGGCCGAACGGGTGGTCTT CGAGCGCCAGGAGCCACCCGCGAAGCCGGCCGAGCCTGAGAAGCCCGATGCCGCGAACGCGGCCGAGACGCCGCCTAGCG ACGCGAGCAAGCCTGCGCGCAAGAAGAAGTCAGCGGGCGGCGAATCTTGA Protein sequence : MARKQCQVCGQPATVRVEANLNGRHSTMLLCDDHYRQLVRQQKRTVSPLEALFGSRSGLFEDFLGNDFFRIGDDAPSMTA DTDEVVDASFGEPAPAGTGTARRRGSGLASRISEQSEALLQEAARHAAEFGRAEVDTEHLLLALSDSDVVKTILGQFKIK VDDLKRQIESEAKRGDKPFEGEIGVSPRVKDALSRAFVASNELGHSYVGPEHFLIGLAEEGEGLAANLLRRYGLTPQALR QQVSKVVGKGAEDGRAETPTNTPELDKYSRDLTKMAREGKLDPVIGRAQEIETTIEVLARRKKNNPVLIGEPGVGKTAIV EGLAQRMVAGEVPETLRGKRLVELNINAMVAGAKYRGEFEERVQKVLKEVTEHQDELILFIDEVHAIVGAGQGGGEGGLD VANVFKPMMARGELNLIGATTLNEYQKYIEKDAALERRFQPVMVPEPTVAQTMMILRGLRDTFEAHHKVSITEDAIIAAA ELSDRYITARFLPDKAIDLLDQAAARVKLSATARPVAVQELESELHQLRREQDYVASRKQYDKAAELGKRIEAKETELKK LVEEWERERASGSAEVKAEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVRAVADSVRLSRAGLREGS KPVATFLFLGPTGVGKTELAKALAESIYGDEGALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYSVLL LDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKARGAGGEEYVKTKSEVMDVLRGHFR PEFLNRIDEIIVFHALGKEEIRHIVGLQLDRVARNAASQGVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSELETALA REMLGGSIGKADHASARWDDKAERVVFERQEPPAKPAEPEKPDAANAAETPPSDASKPARKKKSAGGES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-169 | 47 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-100 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dde_3413 | YP_389901.1 | ATPase AAA | VFG0079 | Protein | 0.0 | 51 |
