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Name : join (Dde_3342) Accession : YP_389831.2 Strain : Desulfovibrio alaskensis G20 Genome accession: NC_007519 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 3322987 - 3324095 bp Length : 1109 bp Strand : + Note : PFAM: Integrase, catalytic core; Transposase IS3/IS911; KEGG: dap:Dacet_2568 transposase IS3/IS911 family protein DNA sequence : ATGAAGAAATCACGATTCACTGAGACGCAGATATTCTCGATCCTCAAAGAGGGCGAAGCCGGTATCAAAGTCAAAGACAT CTGCCGCGCCCACGGTATTTCCGACGCCACCTATTATAGCTGGAAATCCAAGTATGGAGGCATGCAGGCTTCCGATCTGA AACGGATGAAGAATATGGAGGCTGAGCTGACGCAGTTGAAGCGGATGTATGCGGACATGGCCCTCGAAAACCGTGCTTTG AAGGATCTGATCGAAAAAAAGCTTTAAGGCCGACTGGGAAACGCGAGGCGGTCGCTTATCTGACTGTCGAGCACAATCTG TCCATACTACGCAGTTGCCGCTGCGTGGGCTTATCCAGGACGGCCTATTATCGGTTGCCTGCAAGTGGGAGCCGTGTTCA CGAAGTCATCGAGGCGATCAACTCATTAATAGACAAACACCCTCGCTGGGGATTCTGGAAGTGCTTCAAGGTACTGCGTC GCAAGCATTGCTGGAACCACAAGAGGGTATATCGCGTCTACTGCGAGCTGCGGCTGAACCTGAAGAGCCGGGCAAAGAAG CGGTTGCCTCAACGCACTAAGCAGCCGCTGTCGATCCCGGCCCAGCCCAACCTGACGTGGTCTGCCGACTTCATGAGCGA CTCGCTTTATGCGGGGAAACGATTTCGAACCTTCAACGTTATTGACGACTTCAACCGCGAACTGCTGCACGTCGAAATTG ACACCTCCATTACCGGAAGGCGGTTAATCCGAGTGTTTGAACGGCTACGCTTGGAACGAGGCCTTCCCCAAGTGCTGAGG ACGGACAACGGACCGGAATTCCTTTCCGGTGAGTTTGTAGCCTGGGCCGAGTCGGCAGGAATGAGCATCCAATATATTCA ACCCGGAGAACCTAATCAGAACGCGTACATTGAACGGTTCAACCGGACATATCGCACCGAAGTGCTTGATCTCTATCTCT TCAGGACTCTGAATGAGGTCCGGGAGATCACCCACTGGTGGAAGATTGAATACAACGAACAGCGGCCCCATGACTCTCTC GGGGACCTGACACCCTCCGAGTTTTTATCCAACAACGCTGGAAACTCTATTTTTCAACTGTCCTCTTGA Protein sequence : MKKSRFTETQIFSILKEGEAGIKVKDICRAHGISDATYYSWKSKYGGMQASDLKRMKNMEAELTQLKRMYADMALENRAL KDLIEKKALRPTGKREAVAYLTVEHNLSILRSCRCVGLSRTAYYRLPASGSRVHEVIEAINSLIDKHPRWGFWKCFKVLR RKHCWNHKRVYRVYCELRLNLKSRAKKRLPQRTKQPLSIPAQPNLTWSADFMSDSLYAGKRFRTFNVIDDFNRELLHVEI DTSITGRRLIRVFERLRLERGLPQVLRTDNGPEFLSGEFVAWAESAGMSIQYIQPGEPNQNAYIERFNRTYRTEVLDLYL FRTLNEVREITHWWKIEYNEQRPHDSLGDLTPSEFLSNNAGNSIFQLSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 8e-68 | 53 |
