Gene Information

Name : join (Dde_3342)
Accession : YP_389831.2
Strain : Desulfovibrio alaskensis G20
Genome accession: NC_007519
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3322987 - 3324095 bp
Length : 1109 bp
Strand : +
Note : PFAM: Integrase, catalytic core; Transposase IS3/IS911; KEGG: dap:Dacet_2568 transposase IS3/IS911 family protein

DNA sequence :
ATGAAGAAATCACGATTCACTGAGACGCAGATATTCTCGATCCTCAAAGAGGGCGAAGCCGGTATCAAAGTCAAAGACAT
CTGCCGCGCCCACGGTATTTCCGACGCCACCTATTATAGCTGGAAATCCAAGTATGGAGGCATGCAGGCTTCCGATCTGA
AACGGATGAAGAATATGGAGGCTGAGCTGACGCAGTTGAAGCGGATGTATGCGGACATGGCCCTCGAAAACCGTGCTTTG
AAGGATCTGATCGAAAAAAAGCTTTAAGGCCGACTGGGAAACGCGAGGCGGTCGCTTATCTGACTGTCGAGCACAATCTG
TCCATACTACGCAGTTGCCGCTGCGTGGGCTTATCCAGGACGGCCTATTATCGGTTGCCTGCAAGTGGGAGCCGTGTTCA
CGAAGTCATCGAGGCGATCAACTCATTAATAGACAAACACCCTCGCTGGGGATTCTGGAAGTGCTTCAAGGTACTGCGTC
GCAAGCATTGCTGGAACCACAAGAGGGTATATCGCGTCTACTGCGAGCTGCGGCTGAACCTGAAGAGCCGGGCAAAGAAG
CGGTTGCCTCAACGCACTAAGCAGCCGCTGTCGATCCCGGCCCAGCCCAACCTGACGTGGTCTGCCGACTTCATGAGCGA
CTCGCTTTATGCGGGGAAACGATTTCGAACCTTCAACGTTATTGACGACTTCAACCGCGAACTGCTGCACGTCGAAATTG
ACACCTCCATTACCGGAAGGCGGTTAATCCGAGTGTTTGAACGGCTACGCTTGGAACGAGGCCTTCCCCAAGTGCTGAGG
ACGGACAACGGACCGGAATTCCTTTCCGGTGAGTTTGTAGCCTGGGCCGAGTCGGCAGGAATGAGCATCCAATATATTCA
ACCCGGAGAACCTAATCAGAACGCGTACATTGAACGGTTCAACCGGACATATCGCACCGAAGTGCTTGATCTCTATCTCT
TCAGGACTCTGAATGAGGTCCGGGAGATCACCCACTGGTGGAAGATTGAATACAACGAACAGCGGCCCCATGACTCTCTC
GGGGACCTGACACCCTCCGAGTTTTTATCCAACAACGCTGGAAACTCTATTTTTCAACTGTCCTCTTGA

Protein sequence :
MKKSRFTETQIFSILKEGEAGIKVKDICRAHGISDATYYSWKSKYGGMQASDLKRMKNMEAELTQLKRMYADMALENRAL
KDLIEKKALRPTGKREAVAYLTVEHNLSILRSCRCVGLSRTAYYRLPASGSRVHEVIEAINSLIDKHPRWGFWKCFKVLR
RKHCWNHKRVYRVYCELRLNLKSRAKKRLPQRTKQPLSIPAQPNLTWSADFMSDSLYAGKRFRTFNVIDDFNRELLHVEI
DTSITGRRLIRVFERLRLERGLPQVLRTDNGPEFLSGEFVAWAESAGMSIQYIQPGEPNQNAYIERFNRTYRTEVLDLYL
FRTLNEVREITHWWKIEYNEQRPHDSLGDLTPSEFLSNNAGNSIFQLSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 8e-68 53