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Name : Dde_2973 (Dde_2973) Accession : YP_389462.2 Strain : Desulfovibrio alaskensis G20 Genome accession: NC_007519 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 2955582 - 2957000 bp Length : 1419 bp Strand : - Note : KEGG: dvu:DVU2906 UmuC protein; PFAM: DNA-repair protein, UmuC-like DNA sequence : GTGGATGTGACCGTACTGGGCAGAGCTGCCTGTTCCCGCGTGCGGCATGACGGGGGAACACCGTCCGCACCCGCGGCACA GCGGCAGGGGCGTCCGTTGTATGCGCTTGTGGACTGCAACAGTTTTTATGTTTCCTGCGAGCGGGTTTTCAGGCCCGACC TTGTCCGCCGCCCCGTGGTTGTGCTGTCCAACAACGACGGCTGCATCATTGCACGCTCGGCAGAGGCTAAAGCTCTGGGT ATTCCCATGGGGGCCCCGTGGTTCAAGGTGCGCAGACATGCTGAGTCCGCGGGGGTGACCGTGTTTTCGTCCAATTATGC CTTGTACGGTGATATGTCGTCACGCGTCATGCGGGTGCTGGAGCGTTTCTGTCCGGATGTGCATGTGTATTCCATTGATG AGGCTTTTATGCGGCTGGACAGCCTGATCATGCCGCCGGGTATGTCGCCGGAGCGGTATGCGGCGTGTCTGCGGCGCGAG GTGTACCGGCGTACAGGCATTCCCGTGTCGGTGGGGCTGGGCTGCACCAAGACTCTTGCCAAGCTGGCAAACAGGCTGAG CAAACAGCAGAATGCCGGAGCGCGGGCCATGGTGCCGGCGGCTTTCCGGTATGCCGGAGTATTCAACTTTGGAGCAGTGA CAGATCCTGACGTTATGGATGCGTTGCTGGAAACGCTGGACGTGACGGATGTGTGGGGTGTGGGGGCGCGCCATGCGGGG CGTCTGCGGACATGGGGCATACGCACCGCGCGGGCGCTGCGTGATGCACCGGATGACAGGGTGCGCAGATACATGAGCGT GACCGGTCTGCACACCGTGCTGGAACTGCGCGGCATTTCGTGTCTGCCTCTGGATGATGCGCCGCCGTCGCGCAGGTCGG TTGTCTCTTCGCGGTCATTCGGCACACTGGTGACGCACAAGGAGCATATGCTCGAAGCTGTCACGGCCTATATGACACGG GCCGCCGAAAAACTGCGGCGCGAACAGCTTGAAGCGCACTGCGTGGGGGTTATGATCAGCACCCCGCGCCACGGCGACGG GCCGCGCTATGCCGACAGCGCACAGGTGCAGCTTGCGGTGCCCACCAGCCATACGCCGCAGCTGATAGTCCGCGCCCGCG CCCTGCTGGAGAGTATATGGCGCGACGGCTACCGGTACCAGAAGGCCGGCGTGATGCTTTCGGGGCTTGAATCTGCGGTA TCCCGTCAGGTTTCCATGCTGCCTGCCCTGCAGGGGACAGGGCGGGGACTGGAACGGGGAAGGCGGCTCATGGCGGCGGC CGATGCGGTGAATGCACGTTTCGGAAGGGGAACGCTGGAATACGCGGCGGCCGGTCTGGGAAGGCCGTGGAGCATGAAAC AGGAACACCTGTCGCCCCGCTACACTTCGGACTGGAAAAAACTGCCGCTTGTGCGCTGA Protein sequence : MDVTVLGRAACSRVRHDGGTPSAPAAQRQGRPLYALVDCNSFYVSCERVFRPDLVRRPVVVLSNNDGCIIARSAEAKALG IPMGAPWFKVRRHAESAGVTVFSSNYALYGDMSSRVMRVLERFCPDVHVYSIDEAFMRLDSLIMPPGMSPERYAACLRRE VYRRTGIPVSVGLGCTKTLAKLANRLSKQQNAGARAMVPAAFRYAGVFNFGAVTDPDVMDALLETLDVTDVWGVGARHAG RLRTWGIRTARALRDAPDDRVRRYMSVTGLHTVLELRGISCLPLDDAPPSRRSVVSSRSFGTLVTHKEHMLEAVTAYMTR AAEKLRREQLEAHCVGVMISTPRHGDGPRYADSAQVQLAVPTSHTPQLIVRARALLESIWRDGYRYQKAGVMLSGLESAV SRQVSMLPALQGTGRGLERGRRLMAAADAVNARFGRGTLEYAAAGLGRPWSMKQEHLSPRYTSDWKKLPLVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 3e-55 | 43 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 3e-55 | 43 |
