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Name : Dde_1859 (Dde_1859) Accession : YP_388351.1 Strain : Desulfovibrio alaskensis G20 Genome accession: NC_007519 Putative virulence/resistance : Virulence Product : Restriction endonuclease, type I, EcoRI, R subunit/Type III Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 1907890 - 1910883 bp Length : 2994 bp Strand : - Note : KEGG: geb:GM18_2921 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal DNA sequence : ATGAAACCGACTGACACCAGCGAAAAGGGCCTGGAATCGATTATCGTCGCCTCCCTTGTGGAGGATGCCGGATACGTTCA GGGTGATCCGCAGGACTACGACCGGGAACACGCTGTCGACCTGGCCAAACTACTGCAATTCCTCGCCGCCACCCAACCAG ATACCTATGAGGCTCTCGGCATCGACGAGGAAGGCCCCAAGCGCACCCAGTTTCTGCACCGCCTGCAGGGCGAAATCGCC AAACGCGGCGTGGTAGACGTGCTGCGCGGCGGCATCAAGCACGGCCCGGCCCATGTGGACCTTTTCTACGGCACGCCGAC GCCGGGCAACGTGAAGGCGGCCGAACGGTTCGCGGCCAACATCTTCAGCGTCACCCGCCAGCTTCGCTACAGCCGCAACG AGACCGCGCTCTCCCTCGACATGGCCGTGTTCATCAACGGCCTGCCCATCGCCACCTTCGAACTCAAGAACAAACTCACC AAGCAGACGGTGCTCGATGCCGTGCAACAGTACCAGCGCGACCGCGACCCGAAGGAGCTGCTGTTCCAGTTCGGCCGCTG CGCCGTGCATTTTGCCGTGGACGATCACGAGGTGCGTTTCTGTACCCACCTCAAGGGCAAGGGCTCGTGGTTTCTGCCCT TCGACAAGGGCTACAACGATGGCGCGGGCAATCCGCCCAACCCGGCCGGGCTCGCCACCGACTACCTTTGGAAGGAGACC CTCTCCAAGGAGGGTCTGACCGACATCCTGGAAAACTACGCTCAGGTGGTGGAGGAAAAAGACGAGAAGACCGGCAAAAA GAGGTACAAGCAGATATTCCCTCGCTACCACCAGTTGAAGGTGGTGCGCATGCTGCTGGCCAATGCCGCTGAGAGCGGCA TCGGCAGGCGCTACCTGATCCAGCACTCGGCGGGCAGCGGCAAAAGTAACTCCATCGCCTGGCTGGCGCACCAGCTTGTG GGGCTGGAACACGAGAGCAAGGCGTTGTTCGACTCGGTGATCGTGGTCACCGACCGACGGGTGCTCGACAAACAGATCCG CGACACCATCAAGCAGTTCGCCCAGGTCTCCGCCACAGTCGGCCATGCCGAACACTCCGGCGACCTACGCAAATTCCTCA AGGCCGGGAAGAAAATCATCATCACCACCGTGCAGAAGTTTCCGTTCATCCTCGACGAGATCGGTGACGAACACCGCAAG AGCAAATTCGCCATCATCATCGACGAGGCCCATTCCAGCCAGGGCGGCAAAACCACCGCTGCCATGAACCGCGTGCTGGA GGAGACCGCGCCCTATGGCGGCTCTGATGACGAGGAGGAAGAGACGGTCGAGGACAAGATCAACAAGATCATGGAAGGCC GGAAGATGGTGACCAACGCCAGCTACTTCGCCTTCACCGCGACCCCCAAGAACAAGACCCTGGAGATCTTCGGCGAGCCG GACCCGCAGCCGGACGGCACCGTGAAGCATCACCCGTTCCACAGCTACACCATGAAGCAGGCCATCCAGGAGGGTTTCAT CCTCGATGTGCTGAAGAACTACACCCCGGTGGAGAGCTATTACCGCCTGGCCAAGACCGTGGAGGACGACCCGCTCTTCG ACGCCAACAAGGCCCAGAAAAAGCTGCGCCGCTATGTGGAGTCCCACGAGCACGCCATCCGCGAGAAGGCGGAGATTATG GTGGACCATTTCCACGCCCAGGTGATCGGCCACCGCAAGATCGGCGGCCATGCCCGGGCCATGGTCATCACCAACGGTAT CGAGCGGGCCATCCAGTATTTCCACGCCTTCAGGGACTATCTCAAAGAGCGCAAAAGCCCTTACGCACCCATCGTGGCTT TTTCCGGGGAGCACGAGTACGGCGGCAAGAAAGTCACCGAGTCGACGCTGAACGGCTTTCCCAGCAGCCAGATCCCGGAC AAGGTACAACAGGACCCGTACCGCTTCCTGATCGTCGCCGACAAGTTCCAGACCGGCTACGACGAACCGCTGCTGCACAC CATGTACGTGGACAAGGCGCTCTCCGGCATCAAGGCGGTGCAGACCCTCTCGCGGCTCAATCGCGCCCATCCGCAGAAGC ACGACACTTTTGTGCTCGATTTCTACAACGACTCGGAGACCATCCAGAGGTCGTTCGAGCCCTATTACCGCACCACCATC CTCAGTGACGAGACCGACCCCAACAAGCTCCATGATCTGAAGTCGGATCTGGACGGCTACCAGGTCTATTCGCAGGTACA AATCGACGACCTGGTGGGGCTCTATCTGAACGGCGCGGACCGCGACAAGCTCGACCCGATCCTGGATGCCTGCGTGGCCA CCTACAACGCCGATCTCGATGAGGACGGCCAGGTGGACTTCAAAGGCAAAGCCAAGGCCTTCGTCCGCACCTACGGCTTT CTGTCCTCGATCCTGGCGTACTCGAATGCCGACTGGGAAAAGCTGTCGATCTTCCTGAACTTCCTGATCCCGAAACTCCC CGCGCCCAAGGAAGAGGACCTGTCCCGGGGCATCCTGGAGGCCATCGACATGGACAGCTACCGTGTCGAGGTGAAAACCA GCCTGAAGATCGGCCTTCCGGATCAGGATGCCGAAATCGGACCGGTGCCGACCACCGGTAGTGGCCGCAAACCGGAACCG GAGCTGGACCAACTGAGCAACATCATCAAGGCGTTCAACGACCAGTTCGGCAACATCGATTGGAAGGACGGCGACAAGAT CCGCAAGGTCATTGCCGAGGAGATCCCGGCCAAGGTCGCGGCGGACGCGGCCTACCAGAACGCCATGAAGAACAACGACA AGAAGACCGCCCGGATCGAGCACGACGCCGCGCTGCAACGCGTCATGATCGACCTCTTGTCCGACCACACCGAGCTGTTC AAGCAGTTCAGCGACAACCCGTCGTTCAAGAAATGGCTTGGCGACACCATCTTCGGCGTGACCTATCAGCAACAGGCCGA ACAATCCGCAACGGGGGCGAGCCATGGACGTTAA Protein sequence : MKPTDTSEKGLESIIVASLVEDAGYVQGDPQDYDREHAVDLAKLLQFLAATQPDTYEALGIDEEGPKRTQFLHRLQGEIA KRGVVDVLRGGIKHGPAHVDLFYGTPTPGNVKAAERFAANIFSVTRQLRYSRNETALSLDMAVFINGLPIATFELKNKLT KQTVLDAVQQYQRDRDPKELLFQFGRCAVHFAVDDHEVRFCTHLKGKGSWFLPFDKGYNDGAGNPPNPAGLATDYLWKET LSKEGLTDILENYAQVVEEKDEKTGKKRYKQIFPRYHQLKVVRMLLANAAESGIGRRYLIQHSAGSGKSNSIAWLAHQLV GLEHESKALFDSVIVVTDRRVLDKQIRDTIKQFAQVSATVGHAEHSGDLRKFLKAGKKIIITTVQKFPFILDEIGDEHRK SKFAIIIDEAHSSQGGKTTAAMNRVLEETAPYGGSDDEEEETVEDKINKIMEGRKMVTNASYFAFTATPKNKTLEIFGEP DPQPDGTVKHHPFHSYTMKQAIQEGFILDVLKNYTPVESYYRLAKTVEDDPLFDANKAQKKLRRYVESHEHAIREKAEIM VDHFHAQVIGHRKIGGHARAMVITNGIERAIQYFHAFRDYLKERKSPYAPIVAFSGEHEYGGKKVTESTLNGFPSSQIPD KVQQDPYRFLIVADKFQTGYDEPLLHTMYVDKALSGIKAVQTLSRLNRAHPQKHDTFVLDFYNDSETIQRSFEPYYRTTI LSDETDPNKLHDLKSDLDGYQVYSQVQIDDLVGLYLNGADRDKLDPILDACVATYNADLDEDGQVDFKGKAKAFVRTYGF LSSILAYSNADWEKLSIFLNFLIPKLPAPKEEDLSRGILEAIDMDSYRVEVKTSLKIGLPDQDAEIGPVPTTGSGRKPEP ELDQLSNIIKAFNDQFGNIDWKDGDKIRKVIAEEIPAKVAADAAYQNAMKNNDKKTARIEHDAALQRVMIDLLSDHTELF KQFSDNPSFKKWLGDTIFGVTYQQQAEQSATGASHGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0013c | ACA01830.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 2e-178 | 42 |
| VC1765 | NP_231400.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 1e-178 | 42 |
| VC0395_A1363 | YP_001217306.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 1e-178 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dde_1859 | YP_388351.1 | Restriction endonuclease, type I, EcoRI, R subunit/Type III | VFG1098 | Protein | 5e-179 | 42 |
