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Name : Dde_0196 (Dde_0196) Accession : YP_386692.1 Strain : Desulfovibrio alaskensis G20 Genome accession: NC_007519 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 179923 - 181206 bp Length : 1284 bp Strand : - Note : TIGRFAM: Seryl-tRNA synthetase, class IIa; KEGG: dvl:Dvul_2740 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal DNA sequence : ATGCTTGACCTTAAACTGCTGCAGAACAATCCCGAAGTGGTTGCCGAGGCCCTTGCCAAACGCAATTCGGGCATTGATAT CACCCTGTTTACCGCACTTGACCAGCGCCGCAGAGAACTGCTGCTGGAAGTGGAAGCGCTGAAAAGCGAACGCAACAAGG CTTCCGGCGATGTCGCCCGCATGAAGCGCGCCGGAGAAAACGCCGACGCACTCATCGAAAAACTGGGCGCTCTGTCAGAC CGCATCAAAACACTGGACGCTGAAACCGAAACGGTAAAAGCCGAAGTGCACCAGTGGCTCATTTCTCTGCCCAATATCCC GCACGAAAGCGTTCCCGCCGGAGCAGACGAAAACGACAACGTATTTCTGCATGCATGGGGAGAAAAGCCTTCTTTTGACT TCACTCCCAAAGAGCACTGGGAAATCGGCCCTGCACTGGGGCTTGATTTTGAACGCGGCAGCCGTCTGACGGGCAGCCGT TTCACCGTGCTGTGGCACTGGGCGGCAAAGCTGGAACGCGCCCTGACGGCATTCTTTCTGGACGTGCACACCCGCGAACA CGGGTACATGGAAGTCTACCCGCCCGCCATGGTCAACGCCCAGACCATGACCGGCACCGGACAGCTGCCCAAGTTCGAGG AAGACCTCTTCAAGCTGCGCGATTCCGAGTACTATCTTATTCCCACGGCAGAAGTACCGCTGACAAACCTGCACAGCGGC GAAGTGGTGCCGGAAGAAAAACTGCCCATAGCCTATACCGCGCAGACACAGTGCTTCCGCTCCGAAGCGGGCAGCTACGG CAAGGATACCAAAGGCTTCATACGCCAGCATCAGTTCACCAAAGTGGAAATGGTGCGGTTTGCCCACCCTGAAAAATCGT TTGAAGAGCTGGAAAAACTGCGCAGTCACGCCGAAGTGCTGTTGCAGAAGCTGGGCCTGCATTACAGGGTTGTCACCCTG TGCAGCGGGGATATGGGCTTTTCTGCGGCAAAAACATACGATCTGGAAGTGTGGCTGCCCGGACAGGATAAATACCGCGA GATATCCTCGTGTTCCAACTGCACCGATTTTCAGGCCCGCAGAGCCAATATCCGCACCAGACTGGCCGATGCTAAAAAAC CTGTGTTCCTGCACACGCTCAACGGTTCGGGGCTGGCTGTGGGCCGTACGCTGGTGGCCATACTGGAAAACTACCAGCAG GCTGACGGCAGTGTGGTGGTGCCCGAAGTTCTGCGTCCCTACATGGGCGGCGTGGCACTGCTGACTCCCGACGGACCTTT CTAG Protein sequence : MLDLKLLQNNPEVVAEALAKRNSGIDITLFTALDQRRRELLLEVEALKSERNKASGDVARMKRAGENADALIEKLGALSD RIKTLDAETETVKAEVHQWLISLPNIPHESVPAGADENDNVFLHAWGEKPSFDFTPKEHWEIGPALGLDFERGSRLTGSR FTVLWHWAAKLERALTAFFLDVHTREHGYMEVYPPAMVNAQTMTGTGQLPKFEEDLFKLRDSEYYLIPTAEVPLTNLHSG EVVPEEKLPIAYTAQTQCFRSEAGSYGKDTKGFIRQHQFTKVEMVRFAHPEKSFEELEKLRSHAEVLLQKLGLHYRVVTL CSGDMGFSAAKTYDLEVWLPGQDKYREISSCSNCTDFQARRANIRTRLADAKKPVFLHTLNGSGLAVGRTLVAILENYQQ ADGSVVVPEVLRPYMGGVALLTPDGPF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-106 | 56 |
