Gene Information

Name : Dde_1494 (Dde_1494)
Accession : YP_387988.1
Strain : Desulfovibrio alaskensis G20
Genome accession: NC_007519
Putative virulence/resistance : Resistance
Product : chloramphenicol O-acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 1515122 - 1515778 bp
Length : 657 bp
Strand : +
Note : KEGG: fbl:Fbal_2105 chloramphenicol acetyltransferase

DNA sequence :
ATGACTAAAGACAGCATCTTCACCAGTCCGTTCAAGGGCATTCCCCTGCATGAGCAGGTAAGCAATCCGAACATAACAGT
CGGCCGTTACAGTTATTATTCCGGGTATTACCACAACCACCCGTTTGAAGACTGTGTCCGCTATCTTATGCCGCAACCGG
ATACCGTGGACAGGCTGATCATAGGCAGCTTCTGCTCCATCGGAACGGGCGCCAGCTTTGTCATGGCGGGCAATCAGGGG
CATCGTACCGACTGGATAAGCACTTTTCCCTTCTACTACGCAGGCAATGCCGAATTTTCCGGTGCCCGTGACGGCTACAG
GCCGGCCGGAGATACGGTGGTGGGCAGCGATGTGTGGATAGGAGCCGAAGCCATGATCATGCCGGGAGTGTGTATCGGGC
ACGGGGCTGTCATTGCTTCGCGTGCCGTGGTCACTTCTGATGTGCCTCCGTACGCCGTGGTGGCCGGCATGCCCGCCAGA
CAGCTGCGTGTCCGGTTTGATGAGAAAAGTGTGGCCATGCTGCTTGAAATGGCGTGGTGGGAGTGGCCGCAGGATATGCT
GAGTGCTGCCATGCCGCTGCTGACCTCACAAAATGTGGGTGAACTCTACCGTTTCTGGAAAAGTTATGGTAACAGGACGG
CAAACGTCACGGCATGA

Protein sequence :
MTKDSIFTSPFKGIPLHEQVSNPNITVGRYSYYSGYYHNHPFEDCVRYLMPQPDTVDRLIIGSFCSIGTGASFVMAGNQG
HRTDWISTFPFYYAGNAEFSGARDGYRPAGDTVVGSDVWIGAEAMIMPGVCIGHGAVIASRAVVTSDVPPYAVVAGMPAR
QLRVRFDEKSVAMLLEMAWWEWPQDMLSAAMPLLTSQNVGELYRFWKSYGNRTANVTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 2e-58 61
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-57 61
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-57 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dde_1494 YP_387988.1 chloramphenicol O-acetyltransferase NC_002516.2.878374.p Protein 4e-59 65
Dde_1494 YP_387988.1 chloramphenicol O-acetyltransferase AY123251.gene2.p01 Protein 6e-59 61
Dde_1494 YP_387988.1 chloramphenicol O-acetyltransferase AY740681.1.gene5.p01 Protein 6e-58 61
Dde_1494 YP_387988.1 chloramphenicol O-acetyltransferase AF322577.2.gene4.p01 Protein 6e-58 61
Dde_1494 YP_387988.1 chloramphenicol O-acetyltransferase JF268688.1.gene6.p01 Protein 9e-54 58
Dde_1494 YP_387988.1 chloramphenicol O-acetyltransferase CP001581.1.gene990.p Protein 2e-44 43
Dde_1494 YP_387988.1 chloramphenicol O-acetyltransferase NC_011595.7057349.p0 Protein 1e-28 41
Dde_1494 YP_387988.1 chloramphenicol O-acetyltransferase NC_010410.6000796.p0 Protein 1e-28 41