Gene Information

Name : Gmet_0688 (Gmet_0688)
Accession : YP_006719652.1
Strain : Geobacter metallireducens GS-15
Genome accession: NC_007517
Putative virulence/resistance : Virulence
Product : winged helix transcriptional response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 756057 - 756719 bp
Length : 663 bp
Strand : -
Note : 'domains: REC, trans_reg_C'

DNA sequence : 
ATGCGAATTTTGTTGGTTGAAGATGACCGGATGATTGGCGAGGCGGTGGAACAAGCGTTGAAGGATGCCGCCTATGCCGT
GGACTGGGTCCGTGACGGCATCAGCGCCTCCGACGCCGTTGAAACCGGCGAATATCAACTGGTGATCCTCGATCTGGGGC
TCCCCGGACGGGACGGTCTGGGGGTGCTGGAACGGATGCGCGGCGACGGGAACAACGCCGCCGTTCTCATCGTCACTGCC
CGCGATGCCCTCGATGACCGGATTCGTGGCCTCGATCTGGGTGCGGACGACTATCTGGTCAAGCCGTTCGCGGTAGGCGA
ACTGCTGGCCAGGATCCGGGCCGTAAGCCGCCGCCAGACGGGGAGCGCTGCCCCACTTCTTACGAACGGGGTCGTTACCC
TTGACCCGGTTAGCAAGGAAGCCGTCTGCGGCGAACGGCGCTGCCGCCTCACCGCCCGTGAGTTCTCGCTACTGCAGGCT
CTGCTCGTGCGCCCCGGCGCAATCCTTTCCCGTGATGAGCTGGAAACCCGCATCTATGGCTGGAATGAGGAAGTGGAGAG
CAATGCCGTCGAATTCCTGATCCATTCGGTACGCAAGAAACTGGGGAGCGAGTCAATCAGAAATGTTCGGGGGATGGGAT
GGATGGTGGATCGCAACCAGTGA

Protein sequence : 
MRILLVEDDRMIGEAVEQALKDAAYAVDWVRDGISASDAVETGEYQLVILDLGLPGRDGLGVLERMRGDGNNAAVLIVTA
RDALDDRIRGLDLGADDYLVKPFAVGELLARIRAVSRRQTGSAAPLLTNGVVTLDPVSKEAVCGERRCRLTAREFSLLQA
LLVRPGAILSRDELETRIYGWNEEVESNAVEFLIHSVRKKLGSESIRNVRGMGWMVDRNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-26 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gmet_0688 YP_006719652.1 winged helix transcriptional response regulator BAC0487 Protein 1e-31 42
Gmet_0688 YP_006719652.1 winged helix transcriptional response regulator BAC0288 Protein 3e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gmet_0688 YP_006719652.1 winged helix transcriptional response regulator VFG0473 Protein 2e-33 45