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Name : tssC (Gmet_0279) Accession : YP_006719242.1 Strain : Geobacter metallireducens GS-15 Genome accession: NC_007517 Putative virulence/resistance : Virulence Product : type VI secretion system needle sheath protein TssC Function : - COG functional category : - COG ID : - EC number : - Position : 310458 - 311936 bp Length : 1479 bp Strand : + Note : - DNA sequence : ATGAGCGTAGAACAGCAAAACACCGCAGCAGTCGAGAGCCGGATAGAAGGATCGCTTCTGGAGGAGATTGTCCAGGCCAC GAAGCTCCAGCCCGCCGACGAGGCCTACTCCATCACCAAGAAGGGGGTCGAGGCCCTTATCACCCAACTTCTGGAGCCGG GGACCGAGACCCCGAAGGTCTCCAAGGCGGTCCTCGACGACATGATCGCCGAGATCGACAAGAAGCTTTCCCGGCAGATG GACGAGATCCTCCACAATACCCAGTTCCAGAAGCTGGAATCCTCCTGGCGTTCCCTCCACTTCCTGGTGGACCGGACCGA CTTCCGGGAGAACAACCGGATCGAGATCATGAACGCCACCAAGGATGAGCTCCTGGACGACTTCGAGGATGCTCCCGAGG TGGCCAAGTCGGGGCTCTACAAGACCGTCTATTCCGCCGAGTACGGCCAGTTCGGCGGCAAACCCTACGGCGCCATTATC GGCAACTACGACTTCGGCCCCGGCCCCCAGGACATCAAGCTTCTCCAGAGCCTGGCCGCCGTGTCCGGCATGGCCCACGC CCCCTTCATCGCCGCCGCTTCCCCCCAGTTCTTCGGCTGCGACGACTACACGGCGCTGCCGAACCTCAAAGACATCAAGT CGATCCTCGAAGGCCCCCAGTACGCCAAGTGGCAGTCGTTCCGGGAGAGCGAGGACGCCCGCTACGTGGGGCTGGCCCTG CCCCGGTTCCTCCTGCGGCTCCCCTACGGCGAGGCCACCAAGCCGGTGAAGAGCTTCAACTACGAGGAGAGCGTCTCCGC CGGCCACGACCGCTACTGCTGGGGGAACGCCGCCTTCTCCTTTGCCACGCGGCTTACCGAGAGCTTCGCCAACTTCCGCT GGTGCGCCAACATCATCGGCCCCCAGGGAGGCGGCGCGGTGCATGATCTACCCCTCCACCAGTACGAGGCCATGGGGGCC ATCCAGACCAAGATTCCCACGGAAGTGCTCGTCAGCGAGCGGCGCGAATTCGAACTGGCCGAGGAAGGGTTCATCGCCCT CACCATGAGAAAGGGGAGCGACAACGCCGCCTTCTTCTCCGCCAACTCCGTGCAGAAGCCGAAATACTTCGGCACCAGCA AGGAGGGGAAAGAGGCCGAGCTCAACTACAAGCTGGGGCTCCAGCTCCCCTACATGTTCATCGTGAGCCGCCTCGCCCAC TACCTGAAAGTCATCCAGCGGGAGCACATCGGCACCTGGAAGGAGCGGGGCGACCTGGAAAACGAGCTGAACCTCTGGAT CCGCCAGTATGTCTCCGAGATGGACAACCCCATGCCCGGCGTGCGGAGCAGAAGGCCCCTGCGCCAGGCCCAGGTCACCG TAGAGGAAGTCCCCGGCGAGCCCGGCTGGTACCGGGTCGGCCTTAAGGTTACCCCCCACTTCAAGTACATGGGGGCTTAT TTTACCCTCTCTTTGGTTGGAAAGCTGGATAAAGAATAA Protein sequence : MSVEQQNTAAVESRIEGSLLEEIVQATKLQPADEAYSITKKGVEALITQLLEPGTETPKVSKAVLDDMIAEIDKKLSRQM DEILHNTQFQKLESSWRSLHFLVDRTDFRENNRIEIMNATKDELLDDFEDAPEVAKSGLYKTVYSAEYGQFGGKPYGAII GNYDFGPGPQDIKLLQSLAAVSGMAHAPFIAAASPQFFGCDDYTALPNLKDIKSILEGPQYAKWQSFRESEDARYVGLAL PRFLLRLPYGEATKPVKSFNYEESVSAGHDRYCWGNAAFSFATRLTESFANFRWCANIIGPQGGGAVHDLPLHQYEAMGA IQTKIPTEVLVSERREFELAEEGFIALTMRKGSDNAAFFSANSVQKPKYFGTSKEGKEAELNYKLGLQLPYMFIVSRLAH YLKVIQREHIGTWKERGDLENELNLWIRQYVSEMDNPMPGVRSRRPLRQAQVTVEEVPGEPGWYRVGLKVTPHFKYMGAY FTLSLVGKLDKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 4e-152 | 58 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 3e-152 | 58 |
| HH0247 | NP_859778.1 | hypothetical protein | Not tested | HHGI1 | Protein | 1e-149 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tssC | YP_006719242.1 | type VI secretion system needle sheath protein TssC | VFG2475 | Protein | 5e-179 | 68 |
| tssC | YP_006719242.1 | type VI secretion system needle sheath protein TssC | VFG2093 | Protein | 5e-169 | 66 |
