Gene Information

Name : kdpE (Gmet_2437)
Accession : YP_006721398.1
Strain : Geobacter metallireducens GS-15
Genome accession: NC_007517
Putative virulence/resistance : Virulence
Product : winged-helix transcriptional response regulator KdpE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2760947 - 2761648 bp
Length : 702 bp
Strand : +
Note : 'domains: REC, trans_reg_C'

DNA sequence : 
ATGCCGAAGGAAAACCGTCTACCGCGGATACTCATAGTCGATGACGAACTGGCGATACGGCGCTTCCTCTGCACCGCCCT
CGATACCGGGGAGTTTTCCCTCCACCAGGCGGAAAACGGCCATACAGCGCTGGCGGCAGCGGTTGCGACGATGCCGGACG
TGATCCTCCTCGACCTGGGGCTTCCGGATATGGACGGGGTTGAAGTCATCCGACGGATACGGGAGTGGTCCCAGGTGCCG
ATCATCGTCCTTTCCGTGCGGGAGCGTGAGGACGACAAGGTGGCTGCGCTGGATGCCGGGGCGGACGACTACCTGACCAA
GCCATTCGGCGTCGCAGAGCTTGTGGCCCGGATTCGCGCGGCACTGCGGCGCGCCTTGCAACAGGTGCCGGAACCCATCT
TCCGTTCCGGAGACCTGGAGGTGGACCTGGCGCGCCGGCGGGTAACGGTCGACGGCAGCGAGTCCCAGCTCACCCCCACC
GAGTACGAACTGCTGCGCCTCCTGGTGGTCCATGCGGGAAAGGTCCTCACCCACAGCCAGATTCTCCGGCAGATATGGGG
GGTCTCCCACCTCGAGCAACCCCACGTGCTGCGGGTGAACATCAGCAACCTGCGCCGCAAAATAGAAATGGACCCCTCCC
GTCCGCGCCACATCCTCACCGAACCCGGAGTCGGCTACCGGCTCCGGAGCGACGGCAGTTGA

Protein sequence : 
MPKENRLPRILIVDDELAIRRFLCTALDTGEFSLHQAENGHTALAAAVATMPDVILLDLGLPDMDGVEVIRRIREWSQVP
IIVLSVREREDDKVAALDAGADDYLTKPFGVAELVARIRAALRRALQQVPEPIFRSGDLEVDLARRRVTVDGSESQLTPT
EYELLRLLVVHAGKVLTHSQILRQIWGVSHLEQPHVLRVNISNLRRKIEMDPSRPRHILTEPGVGYRLRSDGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 2e-36 42
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 1e-36 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_006721398.1 winged-helix transcriptional response regulator KdpE VFG1390 Protein 1e-29 42
kdpE YP_006721398.1 winged-helix transcriptional response regulator KdpE VFG1389 Protein 3e-28 42
kdpE YP_006721398.1 winged-helix transcriptional response regulator KdpE VFG1386 Protein 1e-27 41