Gene Information

Name : lolD-1 (Gmet_2358)
Accession : YP_006721319.1
Strain : Geobacter metallireducens GS-15
Genome accession: NC_007517
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2666007 - 2666684 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence :
ATGAGTAGTCTCCTTGAGGTGATGGATCTCACGAAGGGTTACGGTTCCGGGGAAACCCGAGTCGATGTTCTGAAGGGGAT
AAACCTGACCGTGGCCGAAGGCGAAACCATCGCCCTCGTCGGGGCTTCGGGGACGGGGAAGAGTACGCTTCTCCACATCA
TGGGAACCCTTGACCGACCGACTTCGGGCAGTGTGCGCTTCGGGGGAGAGGATGTCTTCCGGTTGGGTGATGCGGCCCTG
GCCTCGTTCAGGAACCACTCCATCGGCTTTGTGTTCCAGTTCCATCACCTGCTGCCGGAGTTCACGGCCCTTGAGAATGT
CATGATGCCGCTGCTCATTGCCGGCGTTAAGCGCTCTGATGCAGCAGCGCCGGCCAGGGAGCTTCTTGGGGAGGTCGGGC
TTGCGCATCGTCTTACCCATAAACCGGGTGAACTCTCGGGAGGGGAGCAGCAACGGGTCGCCATTGCCAGGGCGCTGGTT
CTCTCTCCAAAGCTTCTTCTGGCTGACGAACCGACCGGCAACCTCGACATGAAGACCAGTGACGAAGTGCATGAAACCCT
TGAGCGTGTTCACCGGAAGCGGGGGGTGACGCTCGTCATCGTTACCCACAACGAGAAACTCGCATCTTACATGGGGCGGA
CGGTCCGTCTGGTGGACGGCCGGGTCGTTGCCGATTAA

Protein sequence :
MSSLLEVMDLTKGYGSGETRVDVLKGINLTVAEGETIALVGASGTGKSTLLHIMGTLDRPTSGSVRFGGEDVFRLGDAAL
ASFRNHSIGFVFQFHHLLPEFTALENVMMPLLIAGVKRSDAAAPARELLGEVGLAHRLTHKPGELSGGEQQRVAIARALV
LSPKLLLADEPTGNLDMKTSDEVHETLERVHRKRGVTLVIVTHNEKLASYMGRTVRLVDGRVVAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-23 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD-1 YP_006721319.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-41 47
lolD-1 YP_006721319.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-41 46
lolD-1 YP_006721319.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-34 44
lolD-1 YP_006721319.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-37 42