Gene Information

Name : Gmet_2273 (Gmet_2273)
Accession : YP_006721233.1
Strain : Geobacter metallireducens GS-15
Genome accession: NC_007517
Putative virulence/resistance : Unknown
Product : transposase/IS protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2576756 - 2577550 bp
Length : 795 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCGACATCCAGCACCAGCGTATGGTCACCCTCTGCGACGACTTGAAGTTTCTGGCGGTGACCGATGTGTACGCCGA
CCTTGCCGATGCTGCGGCAAAGCAGGAGTCGTCATACATCGACTATCTCGAGCAGGTACTCAAGGCCGAGAACGACGTCC
GGCAGGGGCGCTCGCGCCACACCATGGCAAAGCTCGCGGGCTTTCCCGCGATCAAGACCCTTGAGGATTATGACTTCGAT
TTTGCCACCGGCGCCCCGAAGCAGCGAATCCTGGACCTATCGGCAATGGCGTTTCTGGAGCGTCGGGAGAATGTAATCCT
GCTCGGTCCCAGCGGTACCGGCAAGACTCACCTCGCCATTGCCCTCGGCTACCGGGCAACCCAGTGCGGCGTGAAGGTGC
GCTTCATTTCCGCTGCGGACCTGATGCTGCAACTCGAAAGCGCCCAGCGCCAGGGGCGGTACAAGGAAGTAATGCGGCGC
AGTGTCCTGGGGCCGAGACTACTCATCATCGACGAGATTGGATACCTTCCGTTCAGCGAAACACAGGCAAACCTGTTCTT
TCAGGTGATCGCCAAAAGGTACGAAACAGGTTCCGTCATCCTCACCTCGAACCTGAGCTTTGGGGAATGGGAACAGGCTT
TCGGCGGCAACACGGCACTCACATCAGCAATGCTCGACCGGTTGCTGCACCACGCCCATGTCATTCAGATCAGGGGTGAC
AGCTACCGATTGAAAGAGAAGCGCCGAGCTGGCATTCTCGGGCAGCAACTGCCGACACCCCAGATGGATGATTAA

Protein sequence : 
MSDIQHQRMVTLCDDLKFLAVTDVYADLADAAAKQESSYIDYLEQVLKAENDVRQGRSRHTMAKLAGFPAIKTLEDYDFD
FATGAPKQRILDLSAMAFLERRENVILLGPSGTGKTHLAIALGYRATQCGVKVRFISAADLMLQLESAQRQGRYKEVMRR
SVLGPRLLIIDEIGYLPFSETQANLFFQVIAKRYETGSVILTSNLSFGEWEQAFGGNTALTSAMLDRLLHHAHVIQIRGD
SYRLKEKRRAGILGQQLPTPQMDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 3e-65 65
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 7e-82 57
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 9e-82 57
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 7e-82 57
unnamed CAA21402.1 - Not tested HPI Protein 9e-82 57
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 7e-82 57
api84 CAF28558.1 putative transposase Not tested YAPI Protein 7e-82 57
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 7e-82 57
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-81 57
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 7e-82 57
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 9e-82 57
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 9e-82 57
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-81 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gmet_2273 YP_006721233.1 transposase/IS protein VFG1460 Protein 2e-65 65
Gmet_2273 YP_006721233.1 transposase/IS protein VFG1627 Protein 4e-82 57
Gmet_2273 YP_006721233.1 transposase/IS protein VFG1606 Protein 4e-82 57
Gmet_2273 YP_006721233.1 transposase/IS protein VFG1663 Protein 7e-82 57
Gmet_2273 YP_006721233.1 transposase/IS protein VFG1515 Protein 4e-82 57