Gene Information

Name : Gmet_2272 (Gmet_2272)
Accession : YP_006721232.1
Strain : Geobacter metallireducens GS-15
Genome accession: NC_007517
Putative virulence/resistance : Unknown
Product : transposase of ISGme4, IS21 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2575734 - 2576759 bp
Length : 1026 bp
Strand : +
Note : -

DNA sequence :
ATGATCGGAAAGGAAGAGTGTATGGAAGTCAGAATTCTCAAGAAACAGGGCAAAAGCATCCGGGAGATCTCGCGGATCAC
CGGGCTATGCCGAAACACGGTCAGGAAGTTCCTCAGATCAACGGCCGATCCCAGATACAAAGAACGGGCGAAGCGGCCGG
GGAAGCTAGATCCATTTAAAGCCTTTCTCGAAGAGCGGGTGAAGGCGGCGCTGCCACACCGGATTCCTGCTCCGGTGCTT
GCTCGGGAAATTGCCAGCTTTGGCTACGATGGCTGCGAGCGCACCGTAAGAACGTTTTTGGCGACACTTTACTCCCGTGT
CACTCCGGAGCCGGTTGTCCGGTTTGAAACGGAGCCCGGCAAGCAGATGCAAGCCGACTGGTGCGAATTGCGCAGGGGTA
AACACCCATTGTACGCGTTCGTTGGAACCCTTGGTTTCAGCCGCGATTCGTTCGTCGTCTTCACCACCAGCCAGGCCTTT
GATGTCCTTCGTGAGTGCCATGAGATGGCATTTTCCTTCTTCGGCGGCGTCCCGCGTGAAGTGCTCTATGACAACATGAA
GACTGTGGTTCTGGAGCGAAACGCCTTCGGCGAGGGCAAGCACCGCTTCCACTCCGGCCTGTGGGACACAGCCAAGCATT
TCGGGTTTATCCCCCGGCTGTGCAAGCCGTACCGCGCCAAGACCAAGGGAAAGGTCGAGCGGTTCAACCGCTACCTGCGG
TACAGCTTCTACTATCCGCTGGTCTCGCGCCTTAAGCAGGCAGGATTAACTCTCGATGTCGCGACCGCCAACATCGAGGT
CCGTAACTGGCTTAATGACGTAGCCAACTGCCGAATCCATGGCGAGACCAGCGAGCGCCCCTGCGATCGTCTCAAGATCG
AGCGCGCGGCAATGTCGCCGCTGCCGCCAAGGGTTAAGGTTGAGCAGGGCAAGCCGGAAGTCATCACTCCCATGCCGTGG
CCGGTGATCCCACTTCAGCGCCCCGCCTCCTTCTATGATCAGATCCTTCAGGAGGGGCGGCTATGA

Protein sequence :
MIGKEECMEVRILKKQGKSIREISRITGLCRNTVRKFLRSTADPRYKERAKRPGKLDPFKAFLEERVKAALPHRIPAPVL
AREIASFGYDGCERTVRTFLATLYSRVTPEPVVRFETEPGKQMQADWCELRRGKHPLYAFVGTLGFSRDSFVVFTTSQAF
DVLRECHEMAFSFFGGVPREVLYDNMKTVVLERNAFGEGKHRFHSGLWDTAKHFGFIPRLCKPYRAKTKGKVERFNRYLR
YSFYYPLVSRLKQAGLTLDVATANIEVRNWLNDVANCRIHGETSERPCDRLKIERAAMSPLPPRVKVEQGKPEVITPMPW
PVIPLQRPASFYDQILQEGRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 3e-77 49
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 3e-77 49
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 3e-77 49
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 3e-77 49
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 1e-76 48
y2411 NP_669718.1 transposase Not tested HPI Protein 1e-76 48
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 1e-76 48
unnamed CAA21403.1 - Not tested HPI Protein 1e-76 48
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 1e-76 48
api83 CAF28557.1 transposase Not tested YAPI Protein 1e-76 48
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 5e-77 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gmet_2272 YP_006721232.1 transposase of ISGme4, IS21 family VFG1626 Protein 2e-77 49
Gmet_2272 YP_006721232.1 transposase of ISGme4, IS21 family VFG1607 Protein 2e-77 49
Gmet_2272 YP_006721232.1 transposase of ISGme4, IS21 family VFG1514 Protein 2e-77 49
Gmet_2272 YP_006721232.1 transposase of ISGme4, IS21 family VFG1461 Protein 3e-77 48