Gene Information

Name : lolD-2 (Gmet_1518)
Accession : YP_006720485.1
Strain : Geobacter metallireducens GS-15
Genome accession: NC_007517
Putative virulence/resistance : Resistance
Product : lipoprotein release ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1719749 - 1720435 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGCTGAAACTCCACAACGTATGCAAGAGCTACGAGGGGAAGTCACAGGTAACGGCCCTGGCCGGGATCGACCTGGCCAT
CGGAGTCGGCGAGATGGTGGCGATCATGGGTCCCTCAGGCTCGGGGAAATCAACGCTCCTAAACCTCATGGGAGGGCTCG
ATATCCCTACCTCCGGGGAGGTGCTAGTGTCGGGGAAGGACCTGGCCCGGTCGAACGAGAAGGAGCGGTCGCTCTATCGC
CGCTCGCAGATATCCTACATCTTCCAAGCCTACCACCTGATGCCGACCTTGAAGGTGAACCAGAACGTGGCGCTGCCGTT
GCATCTGGCCGGGGTCTCTTCCGGAGAAATCAGCCGACAAGTTGCGCGGGTCCTGCAGGAGGTGGGGCTTGTGGCACGGG
CGAACCACCTCCCGGACGAGCTTTCCGGCGGCGAGCGTCAGCGGGTCGCCATCGCCCGGGCACTGGTCACCGGTGCGCCG
CTGCTCCTGGCCGACGAGCCCACCGGCAACCTGGACAGCGCCCGGGGAGAGGAGATCCTGAACCTGCTTCGCAGCATCCA
TCGGGAGCGGGGGACCACCATCGTCATGGTCACCCACGACCACCATGCCGCTTCCGCCTGCGACCGGCTGATAAAGCTCC
GGGACGGCCGAGTTGAGGGTGACAGCGCCCTCGGAGGCAAACAATGA

Protein sequence : 
MLKLHNVCKSYEGKSQVTALAGIDLAIGVGEMVAIMGPSGSGKSTLLNLMGGLDIPTSGEVLVSGKDLARSNEKERSLYR
RSQISYIFQAYHLMPTLKVNQNVALPLHLAGVSSGEISRQVARVLQEVGLVARANHLPDELSGGERQRVAIARALVTGAP
LLLADEPTGNLDSARGEEILNLLRSIHRERGTTIVMVTHDHHAASACDRLIKLRDGRVEGDSALGGKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-35 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-34 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 44
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD-2 YP_006720485.1 lipoprotein release ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-45 48
lolD-2 YP_006720485.1 lipoprotein release ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-38 48
lolD-2 YP_006720485.1 lipoprotein release ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 9e-45 45
lolD-2 YP_006720485.1 lipoprotein release ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-43 44
lolD-2 YP_006720485.1 lipoprotein release ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 2e-30 41