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Name : pilB (Gmet_1393) Accession : YP_006720359.1 Strain : Geobacter metallireducens GS-15 Genome accession: NC_007517 Putative virulence/resistance : Virulence Product : type IV pilus biogenesis ATPase PilB Function : - COG functional category : - COG ID : - EC number : - Position : 1559620 - 1561326 bp Length : 1707 bp Strand : + Note : - DNA sequence : ATGCAGGCCAGCAGACTGGGAGAACTCCTGGTTCGAAATAACGTCATCACCAAAGAGCAGCTCGCCAAGGCCCTTGAGGA GCAGAAGAGCGCAGACGGGCAGCAGCGCCTCGGCTCCATTCTCATCAAGAACGGTCTCATCTCCGAACCTGATCTTACCT CGTTCCTTTCCAAGCAGTACGGTGTTCCCTCCATCAACCTGAGCGAATTCGAGGCCGAGCAGGCGGTCGTCAAGATCATC CCCGCCGATGTGGCCCAGAAGTACCAGATCGTCCCGGTGAACAGGGCCGGTTCCACCCTGATCATCGCCATGGCCGACCC ATCCAATATCTTCGCCATCGATGACATCAAGTTCATGACCGGCTACAACGTGGAGGTGGTGGTGGCCTCCGAGTCGGCCA TCAAGGCGGCCATCGACAAGTACTACGACCAGTCTGCGTCCCTGGCCGATGTCATGGGCGACCTGGAGATGGACGATCTC GAGGTGATCGACACCGACGACGAGGTGGATGTATCGTCCCTGGAGCGGGCCACCGAAGACGCTCCGGTCGTGAAGCTCGT GAACCTGATCCTGACCGACGCCATCAAGCGGAAGGCCAGCGATATCCATATCGAGCCCTACGAGCGGTCGTTCCGGGTCC GTTACCGGATTGACGGGGTCCTCTACGAGGTGATGAAACCCCCCCTGAAGCTCAAGAACGCCATCACATCCCGAATCAAG ATCATGGCCGAGCTGGACATCGCCGAACGGCGCCTCCCCCAGGACGGCCGGATCAAGATTAAGCTTGGCGGCGGCCAGGA CATGGACTACAGGGTATCGGTTCTTCCGACCCTCTTCGGGGAGAAGGTAGTCCTGCGGCTCCTGGATAAGTCGAACTTGC AGCTGGACATGACCAAGCTGGGTTACGAGCCCGATGCGCTCCACTATTTCAAGGAGGCGATCCACAAGCCCTTCGGCATG GTGCTCGTCACCGGTCCCACGGGGAGCGGCAAGACGGTCTCCCTATACTCGGCCTTGGGAGAGCTCAACAAGACCACTGA AAACATCTCCACTGCCGAAGACCCGGTAGAGTTCAACTTTGCCGGCATCAACCAGGTGCAGATGCACGAGGATATCGGCC TCAACTTCGCCGCTGCTCTCCGCTCATTTCTGCGCCAGGACCCTGACATTATCATGATCGGCGAGATCCGTGACTTCGAG ACCGCCGAGATCGCCATCAAGGCGGCCCTCACCGGGCACCTGGTCCTCTCCACCCTTCACACCAACGATGCCCCGGCCAC CATCAACCGCCTCCTCAACATGGGGGTCGAGCCGTTCCTGGTGGCGTCGGCCGTGAACCTGATTACCGCCCAGCGTCTTG CCCGCCGGGTCTGCTCCGAGTGCAAACAGCCGGAAGAGATCCCGATCCAGGCCCTCATCGATGCCGGTGTTTCCCCCGAC GAGGCGCCGAGCTACGTCTGCTACAAGGGGACCGGCTGCGTCAAGTGCAACAACACCGGCTACAAGGGACGGGTTGGCTT CTATCAGGTCATGCCGATGCTGGAGGAGATCCGGGAGTTGATCCTTAACGGCGCCAATACCGCGGAGATCAAGCGGGAGT CCATGAGGCTCGGGATCAAGACCATGCGCCAGTCGGGGCTTACCAAGCTGAAAGAGGGCGTTACGTCCTTTGAGGAGGTG CTGCGGGTCACCGTGGCCGACGATTAA Protein sequence : MQASRLGELLVRNNVITKEQLAKALEEQKSADGQQRLGSILIKNGLISEPDLTSFLSKQYGVPSINLSEFEAEQAVVKII PADVAQKYQIVPVNRAGSTLIIAMADPSNIFAIDDIKFMTGYNVEVVVASESAIKAAIDKYYDQSASLADVMGDLEMDDL EVIDTDDEVDVSSLERATEDAPVVKLVNLILTDAIKRKASDIHIEPYERSFRVRYRIDGVLYEVMKPPLKLKNAITSRIK IMAELDIAERRLPQDGRIKIKLGGGQDMDYRVSVLPTLFGEKVVLRLLDKSNLQLDMTKLGYEPDALHYFKEAIHKPFGM VLVTGPTGSGKTVSLYSALGELNKTTENISTAEDPVEFNFAGINQVQMHEDIGLNFAAALRSFLRQDPDIIMIGEIRDFE TAEIAIKAALTGHLVLSTLHTNDAPATINRLLNMGVEPFLVASAVNLITAQRLARRVCSECKQPEEIPIQALIDAGVSPD EAPSYVCYKGTGCVKCNNTGYKGRVGFYQVMPMLEEIRELILNGANTAEIKRESMRLGIKTMRQSGLTKLKEGVTSFEEV LRVTVADD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-90 | 46 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-90 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_006720359.1 | type IV pilus biogenesis ATPase PilB | VFG0112 | Protein | 6e-122 | 47 |
| pilB | YP_006720359.1 | type IV pilus biogenesis ATPase PilB | VFG1880 | Protein | 5e-117 | 46 |
| pilB | YP_006720359.1 | type IV pilus biogenesis ATPase PilB | VFG0182 | Protein | 8e-93 | 46 |
| pilB | YP_006720359.1 | type IV pilus biogenesis ATPase PilB | VFG1876 | Protein | 6e-90 | 45 |
| pilB | YP_006720359.1 | type IV pilus biogenesis ATPase PilB | VFG2048 | Protein | 5e-90 | 45 |
| pilB | YP_006720359.1 | type IV pilus biogenesis ATPase PilB | VFG0233 | Protein | 1e-107 | 44 |
